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Sample GSM1014506 Query DataSets for GSM1014506
Status Public on Oct 01, 2013
Title adult hepatocyte parental control [AH_CRTL3]
Sample type RNA
 
Source name AH_CRTL3
Organism Mus musculus
Characteristics strain: C57BL/6
cell type: adult hepatocyte parental control
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using Qiagen mini kit. Quality control and measurement were performed using NanoDrop and Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared using Ambion Totalprep RNA Amplification kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Control sample
SAMPLE 61
Data processing Data was processed by means of Genome Studio v2011 from illumina, Inc.
 
Submission date Oct 03, 2012
Last update date Oct 01, 2013
Contact name Jesper B Andersen
Organization name Copenhagen University
Department Biotech Research and Innovation Centre
Lab Andersen Group
Street address Ole Maaloes Vej 5
City Copenhagen
ZIP/Postal code 2200
Country Denmark
 
Platform ID GPL6885
Series (1)
GSE41312 Modeling Pathogenesis of Primary Liver Cancer in Lineage Specific Cell Types

Data table header descriptions
ID_REF
VALUE Quantile normalized with background noise subtraction
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 2265.588 0
ILMN_2721178 571.5959 0
ILMN_3033922 776.4258 0
ILMN_3092673 3048.99 0
ILMN_2816356 35.36946 0.04887218
ILMN_2808939 1771.355 0
ILMN_2634564 380.0553 0
ILMN_2737647 -8.607047 0.8721805
ILMN_2734484 722.3513 0
ILMN_2952292 118.3375 0.001253133
ILMN_2699078 10.63201 0.2280702
ILMN_1213681 379.0584 0
ILMN_2735413 975.5748 0
ILMN_2735415 1016.338 0
ILMN_2891688 797.0412 0
ILMN_2637698 667.3026 0
ILMN_2674228 289.6438 0
ILMN_2601546 6.271677 0.3107769
ILMN_1230831 37.46954 0.04135338
ILMN_2848071 1327.369 0

Total number of rows: 25697

Table truncated, full table size 751 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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