NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1016732 Query DataSets for GSM1016732
Status Public on Sep 03, 2013
Title mRNA, mouse postnatal day4, biological rep 2
Sample type RNA
 
Source name Lung tissue, mouse postnatal, day4, biological rep 2
Organism Mus musculus
Characteristics strain: C57BL/6
tissue: whole lung
age: 4 days
Extracted molecule total RNA
Extraction protocol Total RNA extracted using miRNeasy mini kit (Qiagen) according to the manufacturer's instructions.
Label Cy3
Label protocol Cy3 labeled RNA was prepared according to the standard Agilent protocol from 500ng total RNA
 
Hybridization protocol Labeled RNA was hybridized for 17 hr at 65C on Agilent 8X60K microRNA array. Arrays were washed according to the manufacturer's protocol.
Scan protocol Slides were scanned immediately after washing on the Agilent DNA Microarray Scanner (G2505B) using one color scan setting for 8x60K array slides
Description gene expression data from lung tissue of postnatal mice
d4_2
Data processing The scanned images were analyzed with Feature Extraction Software 10.7.1.1 (Agilent) using default parameters.
 
Submission date Oct 09, 2012
Last update date Sep 03, 2013
Contact name Kusum Vijay Pandit
E-mail(s) panditkusum@yahoo.com
Phone 412-624-9046
Organization name University of Pittsburgh
Department Medicine-PACCM
Street address 200, Lothrop street, W1200-25A Biomedical Science Tower
City Pittsburgh
State/province PA
ZIP/Postal code 15213
Country USA
 
Platform ID GPL10787
Series (1)
GSE41412 Gene expression data in mouse fetal lungs

Data table header descriptions
ID_REF
VALUE log2 Cyclic lowess normalized signal intensity

Data table
ID_REF VALUE
A_30_P01017425 7.150158275
A_30_P01017426 6.284260995
A_30_P01017427 4.067367491
A_30_P01017428 9.731093342
A_30_P01017429 2.363844144
A_30_P01017430 5.103860505
A_30_P01017431 4.053187628
A_30_P01017432 6.514828675
A_30_P01017433 6.627988952
A_30_P01017434 8.516716016
A_30_P01017435 2.570594856
A_30_P01017436 5.290133844
A_30_P01017437 7.610226221
A_30_P01017438 2.903862493
A_30_P01017439 5.565209056
A_30_P01017440 4.604514708
A_30_P01017441 2.577062931
A_30_P01017442 8.523691668
A_30_P01017443 10.92166758
A_30_P01017444 2.970128696

Total number of rows: 52095

Table truncated, full table size 1318 Kbytes.




Supplementary file Size Download File type/resource
GSM1016732_2_4d_2.txt.gz 3.2 Mb (ftp)(http) TXT
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap