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Sample GSM104738 Query DataSets for GSM104738
Status Public on Mar 11, 2007
Title brownfat_WT1_day3
Sample type RNA
 
Source name brownfat
Organism Mus musculus
Characteristics Strain: C57BL/6J
Gender: male
Age: day3
Genotype: WT
Tissue: brown fat
Extracted molecule total RNA
Extraction protocol Trizol reagents
Label biotin
 
Description brownfatmaleWT1day3
Data processing The results were quantified and analyzed using GCOS 1.2 software (Affymetrix, Inc.) using default values (Scaling, Target Signal Intensity = 500; Normalization, All Probe Sets; Parameters, all set at default values).
 
Submission date Apr 10, 2006
Last update date Sep 21, 2006
Contact name Lola Rahib
E-mail(s) lrahib@mednet.ucla.edu
Phone 310-825-7967
Fax 310-794-5446
Organization name UCLA
Department Human Genetics
Lab Katrina Dipple
Street address 695 Charles E young Drive south Gonda 5335
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL1261
Series (1)
GSE4656 day3 brown fat from wt compared to day3 from Gyk ko

Data table header descriptions
ID_REF
VALUE Signal (GCOS)
ABS_CALL detection
DETECTION P-VALUE detection p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 478.4 P 0.001102
AFFX-BioB-M_at 920 P 0.000147
AFFX-BioB-3_at 310 P 0.000095
AFFX-BioC-5_at 1084.1 P 0.000095
AFFX-BioC-3_at 1132.9 P 0.000052
AFFX-BioDn-5_at 1261.1 P 0.000052
AFFX-BioDn-3_at 6549.1 P 0.000147
AFFX-CreX-5_at 16652.4 P 0.000052
AFFX-CreX-3_at 19461.5 P 0.000044
AFFX-DapX-5_at 1712.6 P 0.000052
AFFX-DapX-M_at 3046.3 P 0.000225
AFFX-DapX-3_at 2810.5 P 0.000052
AFFX-LysX-5_at 163.5 P 0.000147
AFFX-LysX-M_at 430 P 0.015183
AFFX-LysX-3_at 662.7 P 0.000044
AFFX-PheX-5_at 244 P 0.000297
AFFX-PheX-M_at 314.6 P 0.000509
AFFX-PheX-3_at 365.3 P 0.00039
AFFX-ThrX-5_at 340.5 P 0.000857
AFFX-ThrX-M_at 491.4 P 0.00006

Total number of rows: 45101

Table truncated, full table size 1217 Kbytes.




Supplementary data files not provided

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