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Sample GSM104740 Query DataSets for GSM104740
Status Public on Mar 11, 2007
Title brownfat_KO2_day3
Sample type RNA
 
Source name brownfat
Organism Mus musculus
Characteristics Strain: C57BL/6J
Gender: male
Age: day3
Genotype: KO
Tissue: brown fat
Extracted molecule total RNA
Extraction protocol Trizol reagents
Label biotin
 
Description brownfatmaleKO2day3
Data processing The results were quantified and analyzed using GCOS 1.2 software (Affymetrix, Inc.) using default values (Scaling, Target Signal Intensity = 500; Normalization, All Probe Sets; Parameters, all set at default values).
 
Submission date Apr 10, 2006
Last update date Sep 21, 2006
Contact name Lola Rahib
E-mail(s) lrahib@mednet.ucla.edu
Phone 310-825-7967
Fax 310-794-5446
Organization name UCLA
Department Human Genetics
Lab Katrina Dipple
Street address 695 Charles E young Drive south Gonda 5335
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL1261
Series (1)
GSE4656 day3 brown fat from wt compared to day3 from Gyk ko

Data table header descriptions
ID_REF
VALUE Signal (GCOS)
ABS_CALL Detection
DETECTION P-VALUE detection p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 459.7 P 0.000754
AFFX-BioB-M_at 876.9 P 0.000169
AFFX-BioB-3_at 339.7 P 0.00006
AFFX-BioC-5_at 1120.2 P 0.00011
AFFX-BioC-3_at 1118.3 P 0.000044
AFFX-BioDn-5_at 1420.6 P 0.000052
AFFX-BioDn-3_at 6461.7 P 0.000095
AFFX-CreX-5_at 16979.3 P 0.000052
AFFX-CreX-3_at 18186.7 P 0.000044
AFFX-DapX-5_at 2100.4 P 0.000052
AFFX-DapX-M_at 3495.8 P 0.000147
AFFX-DapX-3_at 3321 P 0.000052
AFFX-LysX-5_at 210.6 P 0.000081
AFFX-LysX-M_at 406 P 0.004484
AFFX-LysX-3_at 723.9 P 0.000044
AFFX-PheX-5_at 337.5 P 0.000195
AFFX-PheX-M_at 341.9 P 0.000297
AFFX-PheX-3_at 414.4 P 0.000095
AFFX-ThrX-5_at 425.3 P 0.00141
AFFX-ThrX-M_at 632.4 P 0.00007

Total number of rows: 45101

Table truncated, full table size 1219 Kbytes.




Supplementary data files not provided

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