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Sample GSM105140 Query DataSets for GSM105140
Status Public on Mar 11, 2007
Title brownfat_wt3_day3
Sample type RNA
 
Source name brownfat
Organism Mus musculus
Characteristics Strain: C57BL/6J
Gender: male
Age: day3
Genotype: WT
Tissue: brown fat
Extracted molecule total RNA
Extraction protocol Trizol reagents
Label biotin
 
Description brownfatmalewt3day3
Data processing The results were quantified and analyzed using GCOS 1.2 software (Affymetrix, Inc.) using default values (Scaling, Target Signal Intensity = 500; Normalization, All Probe Sets; Parameters, all set at default values).
 
Submission date Apr 11, 2006
Last update date Sep 21, 2006
Contact name Lola Rahib
E-mail(s) lrahib@mednet.ucla.edu
Phone 310-825-7967
Fax 310-794-5446
Organization name UCLA
Department Human Genetics
Lab Katrina Dipple
Street address 695 Charles E young Drive south Gonda 5335
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL1261
Series (1)
GSE4656 day3 brown fat from wt compared to day3 from Gyk ko

Data table header descriptions
ID_REF
VALUE Signal (GCOS)
ABS_CALL Detection
DETECTION P-VALUE detection p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 585.9 P 0.00141
AFFX-BioB-M_at 801.9 P 0.000754
AFFX-BioB-3_at 338.5 P 0.000195
AFFX-BioC-5_at 1232.3 P 0.000081
AFFX-BioC-3_at 1166.9 P 0.000044
AFFX-BioDn-5_at 1227.3 P 0.000052
AFFX-BioDn-3_at 6793.6 P 0.00011
AFFX-CreX-5_at 15882.5 P 0.000044
AFFX-CreX-3_at 16234.4 P 0.000044
AFFX-DapX-5_at 831.2 P 0.000052
AFFX-DapX-M_at 1822.6 P 0.000662
AFFX-DapX-3_at 1938.5 P 0.00006
AFFX-LysX-5_at 141.5 P 0.000509
AFFX-LysX-M_at 287.8 A 0.0727
AFFX-LysX-3_at 365.9 P 0.000044
AFFX-PheX-5_at 125.4 P 0.010317
AFFX-PheX-M_at 167.4 P 0.004998
AFFX-PheX-3_at 273.8 P 0.004998
AFFX-ThrX-5_at 202.4 P 0.005565
AFFX-ThrX-M_at 331.4 P 0.000297

Total number of rows: 45101

Table truncated, full table size 1220 Kbytes.




Supplementary data files not provided

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