NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM105144 Query DataSets for GSM105144
Status Public on Mar 11, 2007
Title brownfat_KO4_day3
Sample type RNA
 
Source name brownfat
Organism Mus musculus
Characteristics Strain: C57BL/6J
Gender: male
Age: day3
Genotype: KO
Tissue: brown fat
Extracted molecule total RNA
Extraction protocol Trizol reagents
Label biotin
 
Description brownfatmaleKO4day3
Data processing The results were quantified and analyzed using GCOS 1.2 software (Affymetrix, Inc.) using default values (Scaling, Target Signal Intensity = 500; Normalization, All Probe Sets; Parameters, all set at default values).
 
Submission date Apr 11, 2006
Last update date Sep 21, 2006
Contact name Lola Rahib
E-mail(s) lrahib@mednet.ucla.edu
Phone 310-825-7967
Fax 310-794-5446
Organization name UCLA
Department Human Genetics
Lab Katrina Dipple
Street address 695 Charles E young Drive south Gonda 5335
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL1261
Series (1)
GSE4656 day3 brown fat from wt compared to day3 from Gyk ko

Data table header descriptions
ID_REF
VALUE Signal (GCOS)
ABS_CALL Detection
DETECTION P-VALUE detection p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 572.5 P 0.000857
AFFX-BioB-M_at 913.7 P 0.000147
AFFX-BioB-3_at 408 P 0.000127
AFFX-BioC-5_at 1261 P 0.000169
AFFX-BioC-3_at 1019.8 P 0.00006
AFFX-BioDn-5_at 1266 P 0.000052
AFFX-BioDn-3_at 7855.3 P 0.000081
AFFX-CreX-5_at 19464.8 P 0.000052
AFFX-CreX-3_at 22757.2 P 0.000044
AFFX-DapX-5_at 633.3 P 0.000127
AFFX-DapX-M_at 1236.5 P 0.001102
AFFX-DapX-3_at 1288 P 0.000095
AFFX-LysX-5_at 79.8 P 0.004017
AFFX-LysX-M_at 176.4 A 0.102165
AFFX-LysX-3_at 278.7 P 0.000044
AFFX-PheX-5_at 96.5 P 0.046482
AFFX-PheX-M_at 100.3 A 0.131361
AFFX-PheX-3_at 240.5 P 0.011384
AFFX-ThrX-5_at 126.1 P 0.015183
AFFX-ThrX-M_at 205.6 P 0.003595

Total number of rows: 45101

Table truncated, full table size 1219 Kbytes.




Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap