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GEO accession:
Sample GSM106389
Query DataSets for GSM106389
Status
Public on Oct 24, 2006
Title
EdTx study_macrophages_ET-treated_6h_rep1
Sample type
RNA
Source name
Edema toxin-treated macrophages
Organism
Mus musculus
Characteristics
RAW 264.7 macrophages
Extracted molecule
total RNA
Label
Affymetrix
Description
RAW 264.7 macrophages were treated with Edema toxin (2.5 µg/ml of protective antigen and 0.625 µg/ml of Edema factor) for 6 hr.
Data processing
GCOS
Submission date
Apr 24, 2006
Last update date
Apr 26, 2006
Contact name
Ashok K Chopra
E-mail(s)
achopra@utmb.edu
Phone
409-747-0573
Fax
409-747-6869
Organization name
University of Texas Medical Branch
Department
Microbiology & Immunology
Street address
301 University Blvd.
City
Galveston
State/province
TX
ZIP/Postal code
77555
Country
USA
Platform ID
GPL1261
Series (1)
GSE4712
Edema Toxin-treated Macrophage Study
Data table header descriptions
ID_REF
VALUE
Normalized signal value
ABS_CALL
Presence value (absent, marginally present, ot present)
DETECTION P-VALUE
Presence statistic
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
564.6
P
0.00141
AFFX-BioB-M_at
623.1
P
0.000581
AFFX-BioB-3_at
328.7
P
0.011384
AFFX-BioC-5_at
917
P
0.000169
AFFX-BioC-3_at
915.8
P
0.000044
AFFX-BioDn-5_at
2392.4
P
0.000044
AFFX-BioDn-3_at
7100.6
P
0.000258
AFFX-CreX-5_at
13605.6
P
0.000052
AFFX-CreX-3_at
15420.8
P
0.000044
AFFX-DapX-5_at
48.6
A
0.645547
AFFX-DapX-M_at
109
A
0.262827
AFFX-DapX-3_at
19.8
A
0.804734
AFFX-LysX-5_at
2297.1
P
0.000052
AFFX-LysX-M_at
2860.4
P
0.000044
AFFX-LysX-3_at
5763.7
P
0.000044
AFFX-PheX-5_at
8433.6
P
0.000044
AFFX-PheX-M_at
10431.8
P
0.000044
AFFX-PheX-3_at
9272.9
P
0.000044
AFFX-ThrX-5_at
259.6
P
0.002867
AFFX-ThrX-M_at
157.7
P
0.036569
Total number of rows:
45101
Table truncated, full table size
1222 Kbytes
.
Supplementary data files not provided
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