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GEO accession:
Sample GSM106390
Query DataSets for GSM106390
Status
Public on Oct 24, 2006
Title
EdTx study_macrophages_ET-treated_6h_rep2
Sample type
RNA
Source name
Edema toxin-treated macrophages
Organism
Mus musculus
Characteristics
RAW 264.7 macrophages
Extracted molecule
total RNA
Label
Affymetrix
Description
RAW 264.7 macrophages were treated with Edema toxin (2.5 µg/ml of protective antigen and 0.625 µg/ml of Edema factor) for 6 hr.
Data processing
GCOS
Submission date
Apr 24, 2006
Last update date
Apr 26, 2006
Contact name
Ashok K Chopra
E-mail(s)
achopra@utmb.edu
Phone
409-747-0573
Fax
409-747-6869
Organization name
University of Texas Medical Branch
Department
Microbiology & Immunology
Street address
301 University Blvd.
City
Galveston
State/province
TX
ZIP/Postal code
77555
Country
USA
Platform ID
GPL1261
Series (1)
GSE4712
Edema Toxin-treated Macrophage Study
Data table header descriptions
ID_REF
VALUE
Normalized signal value
ABS_CALL
Presence value (absent, marginally present, ot present)
DETECTION P-VALUE
Presence statistic
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
374.6
P
0.001248
AFFX-BioB-M_at
522.6
P
0.000446
AFFX-BioB-3_at
310.2
P
0.000446
AFFX-BioC-5_at
1104
P
0.000195
AFFX-BioC-3_at
1262.7
P
0.000052
AFFX-BioDn-5_at
2133.3
P
0.000052
AFFX-BioDn-3_at
5520.3
P
0.00034
AFFX-CreX-5_at
13906.7
P
0.000052
AFFX-CreX-3_at
16722.5
P
0.000044
AFFX-DapX-5_at
72
M
0.062929
AFFX-DapX-M_at
55.9
A
0.262827
AFFX-DapX-3_at
34.2
A
0.699394
AFFX-LysX-5_at
1066.9
P
0.000044
AFFX-LysX-M_at
1524.2
P
0.00006
AFFX-LysX-3_at
3187.6
P
0.000044
AFFX-PheX-5_at
4042.4
P
0.000044
AFFX-PheX-M_at
5144
P
0.000044
AFFX-PheX-3_at
4699
P
0.000044
AFFX-ThrX-5_at
65.2
A
0.239063
AFFX-ThrX-M_at
119.9
M
0.058444
Total number of rows:
45101
Table truncated, full table size
1219 Kbytes
.
Supplementary data files not provided
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