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GEO accession:
Sample GSM106394
Query DataSets for GSM106394
Status
Public on Oct 24, 2006
Title
EdTx study_macrophages_LPS-treated_3h_rep3
Sample type
RNA
Source name
LPS-treated macrophages
Organism
Mus musculus
Characteristics
RAW 264.7 macrophages
Extracted molecule
total RNA
Label
Affymetrix
Description
RAW 264.7 macrophages were treated with LPS (1 ng/ml) for 3 hr - used as a control for low levels of LPS contamination of purified Edema toxin.
Data processing
GCOS
Submission date
Apr 24, 2006
Last update date
Apr 26, 2006
Contact name
Ashok K Chopra
E-mail(s)
achopra@utmb.edu
Phone
409-747-0573
Fax
409-747-6869
Organization name
University of Texas Medical Branch
Department
Microbiology & Immunology
Street address
301 University Blvd.
City
Galveston
State/province
TX
ZIP/Postal code
77555
Country
USA
Platform ID
GPL1261
Series (1)
GSE4712
Edema Toxin-treated Macrophage Study
Data table header descriptions
ID_REF
VALUE
Normalized signal value
ABS_CALL
Presence value (absent, marginally present, ot present)
DETECTION P-VALUE
Presence statistic
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
432.5
P
0.001593
AFFX-BioB-M_at
476
P
0.000258
AFFX-BioB-3_at
266.3
P
0.001248
AFFX-BioC-5_at
936.5
P
0.000147
AFFX-BioC-3_at
1004.7
P
0.000044
AFFX-BioDn-5_at
1521.3
P
0.000052
AFFX-BioDn-3_at
4798.5
P
0.000297
AFFX-CreX-5_at
12410.1
P
0.000052
AFFX-CreX-3_at
14863.5
P
0.000044
AFFX-DapX-5_at
26.8
A
0.300606
AFFX-DapX-M_at
45.5
A
0.354453
AFFX-DapX-3_at
77.5
A
0.275146
AFFX-LysX-5_at
1452.1
P
0.000044
AFFX-LysX-M_at
2293.9
P
0.000044
AFFX-LysX-3_at
5898.5
P
0.000044
AFFX-PheX-5_at
3617.3
P
0.000044
AFFX-PheX-M_at
6038.3
P
0.000044
AFFX-PheX-3_at
8397.1
P
0.000044
AFFX-ThrX-5_at
104.4
A
0.205732
AFFX-ThrX-M_at
126.5
P
0.020022
Total number of rows:
45101
Table truncated, full table size
1218 Kbytes
.
Supplementary data files not provided
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