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Sample GSM106397 Query DataSets for GSM106397
Status Public on Oct 24, 2006
Title EdTx study_macrophages_LPS-treated_6h_rep3
Sample type RNA
 
Source name LPS-treated macrophages
Organism Mus musculus
Characteristics RAW 264.7 macrophages
Extracted molecule total RNA
Label Affymetrix
 
Description RAW 264.7 macrophages were treated with LPS (1 ng/ml) for 6 hr - used as a control for low levels of LPS contamination of purified Edema toxin.
Data processing GCOS
 
Submission date Apr 24, 2006
Last update date Apr 26, 2006
Contact name Ashok K Chopra
E-mail(s) achopra@utmb.edu
Phone 409-747-0573
Fax 409-747-6869
Organization name University of Texas Medical Branch
Department Microbiology & Immunology
Street address 301 University Blvd.
City Galveston
State/province TX
ZIP/Postal code 77555
Country USA
 
Platform ID GPL1261
Series (1)
GSE4712 Edema Toxin-treated Macrophage Study

Data table header descriptions
ID_REF
VALUE Normalized signal value
ABS_CALL Presence value (absent, marginally present, ot present)
DETECTION P-VALUE Presence statistic

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 359.9 P 0.002023
AFFX-BioB-M_at 509.4 P 0.000258
AFFX-BioB-3_at 356.3 P 0.000169
AFFX-BioC-5_at 1161.7 P 0.00011
AFFX-BioC-3_at 1461.7 P 0.000044
AFFX-BioDn-5_at 1918.5 P 0.000052
AFFX-BioDn-3_at 6336.3 P 0.000297
AFFX-CreX-5_at 13151.8 P 0.000052
AFFX-CreX-3_at 16002.9 P 0.000044
AFFX-DapX-5_at 28.7 A 0.262827
AFFX-DapX-M_at 67.1 A 0.102165
AFFX-DapX-3_at 72.2 A 0.574038
AFFX-LysX-5_at 1452.7 P 0.000044
AFFX-LysX-M_at 2270.6 P 0.000044
AFFX-LysX-3_at 5876.5 P 0.000044
AFFX-PheX-5_at 3846.2 P 0.000044
AFFX-PheX-M_at 6176.4 P 0.000044
AFFX-PheX-3_at 7992 P 0.000044
AFFX-ThrX-5_at 97.1 A 0.216524
AFFX-ThrX-M_at 113.1 P 0.018281

Total number of rows: 45101

Table truncated, full table size 1217 Kbytes.




Supplementary data files not provided

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