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GEO accession:
Sample GSM106427
Query DataSets for GSM106427
Status
Public on Oct 24, 2006
Title
EdTx study_macrophages_untreated_rep2
Sample type
RNA
Source name
Untreated macrophages
Organism
Mus musculus
Characteristics
RAW 264.7 macrophages
Extracted molecule
total RNA
Label
Affymetrix
Description
RAW 264.7 macrophages were untreated - used as a negative control and to filter out random variations between cell cultures.
Data processing
GCOS
Submission date
Apr 24, 2006
Last update date
Apr 26, 2006
Contact name
Ashok K Chopra
E-mail(s)
achopra@utmb.edu
Phone
409-747-0573
Fax
409-747-6869
Organization name
University of Texas Medical Branch
Department
Microbiology & Immunology
Street address
301 University Blvd.
City
Galveston
State/province
TX
ZIP/Postal code
77555
Country
USA
Platform ID
GPL1261
Series (1)
GSE4712
Edema Toxin-treated Macrophage Study
Data table header descriptions
ID_REF
VALUE
Normalized signal value
ABS_CALL
Presence value (absent, marginally present, ot present)
DETECTION P-VALUE
Presence statistic
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
282.7
P
0.004484
AFFX-BioB-M_at
479.6
P
0.00034
AFFX-BioB-3_at
244.1
P
0.000509
AFFX-BioC-5_at
1053.5
P
0.000127
AFFX-BioC-3_at
1048.4
P
0.000044
AFFX-BioDn-5_at
1979.8
P
0.000052
AFFX-BioDn-3_at
5557.6
P
0.000297
AFFX-CreX-5_at
13562.7
P
0.000052
AFFX-CreX-3_at
16578.4
P
0.000044
AFFX-DapX-5_at
5
A
0.824693
AFFX-DapX-M_at
38.6
A
0.470241
AFFX-DapX-3_at
50.2
A
0.5
AFFX-LysX-5_at
1483.1
P
0.000044
AFFX-LysX-M_at
2289.8
P
0.000044
AFFX-LysX-3_at
5157.4
P
0.000044
AFFX-PheX-5_at
4044.5
P
0.000044
AFFX-PheX-M_at
6439.1
P
0.000044
AFFX-PheX-3_at
7344.6
P
0.000044
AFFX-ThrX-5_at
14.8
A
0.672921
AFFX-ThrX-M_at
176.4
M
0.062929
Total number of rows:
45101
Table truncated, full table size
1221 Kbytes
.
Supplementary data files not provided
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