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Sample GSM1067883 Query DataSets for GSM1067883
Status Public on Mar 07, 2013
Title 252800515186-3
Sample type RNA
 
Source name KI2 syn 7/10
Organism Mus musculus
Characteristics genotype/variation: knock-out
tissue: Brain synaptosome
amount in (µg): 0.2
rin number: 10
Extracted molecule total RNA
Extraction protocol Chomzynski extraction protocol.
Label Cy3
Label protocol Agilent - Low RNA input QuickAmp.
 
Hybridization protocol Agilent : 200.0 ng at 65 degree_C during 17 hours.
Scan protocol Arrays were scanned using the Agilent SureScan High Resolution Scanner.
Description KI2 syn 7/10
Data processing LimmaGUI analysis within custom R script with Quantile Normalization.
 
Submission date Jan 22, 2013
Last update date Mar 07, 2013
Contact name Kevin Lebrigand
Organization name IPMC/CNRS
Lab Functional Genomics Platform of Nice-Sophia-Antipolis, France.
Street address 660 route des lucioles
City Valbonne - Sophia-Antipolis
ZIP/Postal code 06560
Country France
 
Platform ID GPL13912
Series (1)
GSE43670 The 3’UTR of FMR1 mRNA is a target of miR101, miR129-5p and miR-221: implications for the molecular pathology of FXTAS at the synapse.

Data table header descriptions
ID_REF
VALUE Log2(signal)

Data table
ID_REF VALUE
1 15.70017818
2 5.300466934
3 5.213718249
4 4.912652784
5 7.73082924
6 5.213718249
7 6.661499249
8 13.11655185
9 5.034533605
10 7.102653326
11 6.511613468
12 5.102904716
13 10.29455245
14 10.51043778
15 5.367429166
16 5.126465547
17 12.20332671
18 7.447125946
19 10.87563831
20 14.71389316

Total number of rows: 62976

Table truncated, full table size 1090 Kbytes.




Supplementary file Size Download File type/resource
GSM1067883_252800515186_201210261101_S01_GE1_107_Sep09_1_3.txt.gz 12.0 Mb (ftp)(http) TXT
Processed data included within Sample table

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