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Sample GSM1068289 Query DataSets for GSM1068289
Status Public on May 01, 2013
Title db_16 weeks_non-fasted_rep_2 [liver]
Sample type RNA
 
Source name liver
Organism Mus musculus
Characteristics age: 16 weeks
fasting status: non-fasted
strain: B6.BKS(D)-Lep rdb/J
diet: D12450B
tissue: liver
Extracted molecule total RNA
Extraction protocol RNA was extracted with QIAGEN RNeasy Lipid Tissue mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Standard Illumina labeling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Sample name: 08W
Data processing The data were quantile normalised using lumi library in R
 
Submission date Jan 23, 2013
Last update date May 01, 2013
Contact name Krzysztof Goryca
Organization name Uniwersytet Warszawski
Department CeNT
Street address Banacha 2c
City Warszawa
ZIP/Postal code 02-097
Country Poland
 
Platform ID GPL6885
Series (1)
GSE43691 Hepatic molecular alterations more than muscle's differentiate obese hyperphagic mice from those prolonged fed with the high-fat diet

Data table header descriptions
ID_REF
VALUE quantile normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 2663.21875 0
ILMN_2721178 753.5625 0
ILMN_3033922 1303.716667 0
ILMN_3092673 5979.829167 0
ILMN_2816356 96.21770833 0.04511
ILMN_2808939 1437.6125 0
ILMN_2634564 471.3958333 0
ILMN_2737647 74.02395833 0.46366
ILMN_2734484 472.6458333 0
ILMN_2952292 137.6604167 0.00376
ILMN_2699078 64.17708333 0.90476
ILMN_1213681 263.1604167 0
ILMN_2735413 635.9145833 0
ILMN_2735415 852.5 0
ILMN_2891688 763.8916667 0
ILMN_2637698 651.4854167 0
ILMN_2674228 244.5270833 0
ILMN_2601546 87.6125 0.11654
ILMN_1230831 65.15 0.86591
ILMN_2848071 761.1375 0

Total number of rows: 25697

Table truncated, full table size 755 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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