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Sample GSM1068300 Query DataSets for GSM1068300
Status Public on May 01, 2013
Title dt_16 weeks_non-fasted_rep_1 [liver]
Sample type RNA
 
Source name liver
Organism Mus musculus
Characteristics age: 16 weeks
fasting status: non-fasted
strain: C57BL/6J
diet: D12492
tissue: liver
Extracted molecule total RNA
Extraction protocol RNA was extracted with QIAGEN RNeasy Lipid Tissue mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Standard Illumina labeling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Sample name: 19W
Data processing The data were quantile normalised using lumi library in R
 
Submission date Jan 23, 2013
Last update date May 01, 2013
Contact name Krzysztof Goryca
Organization name Uniwersytet Warszawski
Department CeNT
Street address Banacha 2c
City Warszawa
ZIP/Postal code 02-097
Country Poland
 
Platform ID GPL6885
Series (1)
GSE43691 Hepatic molecular alterations more than muscle's differentiate obese hyperphagic mice from those prolonged fed with the high-fat diet

Data table header descriptions
ID_REF
VALUE quantile normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 1928.091667 0
ILMN_2721178 609.8333333 0
ILMN_3033922 1251.741667 0
ILMN_3092673 4513.020833 0
ILMN_2816356 102.5291667 0.04261
ILMN_2808939 1883.672917 0
ILMN_2634564 579.7166667 0
ILMN_2737647 84.36875 0.18797
ILMN_2734484 541.7916667 0
ILMN_2952292 159.1770833 0.00251
ILMN_2699078 64.74479167 0.89223
ILMN_1213681 308.065625 0
ILMN_2735413 822.9291667 0
ILMN_2735415 977.6708333 0
ILMN_2891688 555.2229167 0
ILMN_2637698 619.4333333 0
ILMN_2674228 225.075 0
ILMN_2601546 90.40104167 0.10401
ILMN_1230831 76.50104167 0.41103
ILMN_2848071 1462.214583 0

Total number of rows: 25697

Table truncated, full table size 757 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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