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Sample GSM1068311 Query DataSets for GSM1068311
Status Public on May 01, 2013
Title ob_48 weeks_fasted_rep_3 [liver]
Sample type RNA
 
Source name liver
Organism Mus musculus
Characteristics age: 48 weeks
fasting status: fasted
strain: B6.V-Lep ob/J
diet: D12450B
tissue: liver
Extracted molecule total RNA
Extraction protocol RNA was extracted with QIAGEN RNeasy Lipid Tissue mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Standard Illumina labeling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Sample name: 30W
Data processing The data were quantile normalised using lumi library in R
 
Submission date Jan 23, 2013
Last update date May 01, 2013
Contact name Krzysztof Goryca
Organization name Uniwersytet Warszawski
Department CeNT
Street address Banacha 2c
City Warszawa
ZIP/Postal code 02-097
Country Poland
 
Platform ID GPL6885
Series (1)
GSE43691 Hepatic molecular alterations more than muscle's differentiate obese hyperphagic mice from those prolonged fed with the high-fat diet

Data table header descriptions
ID_REF
VALUE quantile normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 2399.908333 0
ILMN_2721178 637.309375 0
ILMN_3033922 1484.033333 0
ILMN_3092673 6747.077083 0
ILMN_2816356 110.6989583 0.00501
ILMN_2808939 897.7260417 0
ILMN_2634564 499.98125 0
ILMN_2737647 82.13333333 0.19048
ILMN_2734484 356.8541667 0
ILMN_2952292 163.1177083 0
ILMN_2699078 60.83020833 0.97118
ILMN_1213681 249.5895833 0
ILMN_2735413 647.1125 0
ILMN_2735415 870.6958333 0
ILMN_2891688 804.3375 0
ILMN_2637698 722.3875 0
ILMN_2674228 273.890625 0
ILMN_2601546 91.1125 0.07268
ILMN_1230831 87.88541667 0.10025
ILMN_2848071 565.3947917 0

Total number of rows: 25697

Table truncated, full table size 753 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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