NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1068315 Query DataSets for GSM1068315
Status Public on May 01, 2013
Title db_48 weeks_fasted_rep_1 [liver]
Sample type RNA
 
Source name liver
Organism Mus musculus
Characteristics age: 48 weeks
fasting status: fasted
strain: B6.BKS(D)-Lep rdb/J
diet: D12450B
tissue: liver
Extracted molecule total RNA
Extraction protocol RNA was extracted with QIAGEN RNeasy Lipid Tissue mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Standard Illumina labeling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Sample name: 34W
Data processing The data were quantile normalised using lumi library in R
 
Submission date Jan 23, 2013
Last update date May 01, 2013
Contact name Krzysztof Goryca
Organization name Uniwersytet Warszawski
Department CeNT
Street address Banacha 2c
City Warszawa
ZIP/Postal code 02-097
Country Poland
 
Platform ID GPL6885
Series (1)
GSE43691 Hepatic molecular alterations more than muscle's differentiate obese hyperphagic mice from those prolonged fed with the high-fat diet

Data table header descriptions
ID_REF
VALUE quantile normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 2472.114583 0
ILMN_2721178 533.1510417 0
ILMN_3033922 1043.135417 0
ILMN_3092673 6020.81875 0
ILMN_2816356 94.875 0.05639
ILMN_2808939 1004.189583 0
ILMN_2634564 571.2083333 0
ILMN_2737647 81.42708333 0.20927
ILMN_2734484 694.2083333 0
ILMN_2952292 143.2291667 0
ILMN_2699078 64.975 0.86717
ILMN_1213681 259.2 0
ILMN_2735413 774.05 0
ILMN_2735415 999.9791667 0
ILMN_2891688 1007.789583 0
ILMN_2637698 723.4427083 0
ILMN_2674228 183.4666667 0
ILMN_2601546 92.33020833 0.07644
ILMN_1230831 73.72083333 0.46867
ILMN_2848071 595.9791667 0

Total number of rows: 25697

Table truncated, full table size 752 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap