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Sample GSM1068362 Query DataSets for GSM1068362
Status Public on May 01, 2013
Title kn_16 weeks_fasted_rep_2 [muscle]
Sample type RNA
 
Source name muscle
Organism Mus musculus
Characteristics age: 16 weeks
fasting status: fasted
strain: C57BL/6J
diet: D12450B
tissue: muscle
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Standard Illumina labeling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Sample name: 17M
Data processing The data were quantile normalised using lumi library in R
 
Submission date Jan 23, 2013
Last update date May 01, 2013
Contact name Krzysztof Goryca
Organization name Uniwersytet Warszawski
Department CeNT
Street address Banacha 2c
City Warszawa
ZIP/Postal code 02-097
Country Poland
 
Platform ID GPL6885
Series (1)
GSE43691 Hepatic molecular alterations more than muscle's differentiate obese hyperphagic mice from those prolonged fed with the high-fat diet

Data table header descriptions
ID_REF
VALUE quantile normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 4935.2125 0
ILMN_2721178 1417.34375 0
ILMN_3033922 1334.195833 0
ILMN_3092673 3993.727083 0
ILMN_2816356 100.2020833 0.01629
ILMN_2808939 193.4333333 0
ILMN_2634564 810.1854167 0
ILMN_2737647 70.82604167 0.13659
ILMN_2734484 1144.585417 0
ILMN_2952292 152.3645833 0
ILMN_2699078 54.76666667 0.65539
ILMN_1213681 616.9395833 0
ILMN_2735413 85.69791667 0.04261
ILMN_2735415 84.04583333 0.04637
ILMN_2891688 824.2916667 0
ILMN_2637698 570.6395833 0
ILMN_2674228 385.2145833 0
ILMN_2601546 84.5125 0.04637
ILMN_1230831 63.31458333 0.30326
ILMN_2848071 83.75625 0.04762

Total number of rows: 25697

Table truncated, full table size 755 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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