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Sample GSM1068383 Query DataSets for GSM1068383
Status Public on May 01, 2013
Title kn_48 weeks_non-fasted_rep_2 [muscle]
Sample type RNA
 
Source name muscle
Organism Mus musculus
Characteristics age: 48 weeks
fasting status: non-fasted
strain: C57BL/6J
diet: D12450B
tissue: muscle
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Standard Illumina labeling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Sample name: 38M
Data processing The data were quantile normalised using lumi library in R
 
Submission date Jan 23, 2013
Last update date May 01, 2013
Contact name Krzysztof Goryca
Organization name Uniwersytet Warszawski
Department CeNT
Street address Banacha 2c
City Warszawa
ZIP/Postal code 02-097
Country Poland
 
Platform ID GPL6885
Series (1)
GSE43691 Hepatic molecular alterations more than muscle's differentiate obese hyperphagic mice from those prolonged fed with the high-fat diet

Data table header descriptions
ID_REF
VALUE quantile normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 4957.397917 0
ILMN_2721178 980.4583333 0
ILMN_3033922 652.525 0
ILMN_3092673 2993.479167 0
ILMN_2816356 119.6635417 0
ILMN_2808939 152.21875 0
ILMN_2634564 560.9291667 0
ILMN_2737647 62.06458333 0.30075
ILMN_2734484 688.375 0
ILMN_2952292 94.54583333 0.00501
ILMN_2699078 54.89791667 0.63409
ILMN_1213681 503.4854167 0
ILMN_2735413 67.6375 0.15288
ILMN_2735415 64.23541667 0.23308
ILMN_2891688 873.1145833 0
ILMN_2637698 536.559375 0
ILMN_2674228 261.8729167 0
ILMN_2601546 76.7125 0.04386
ILMN_1230831 79.03958333 0.03759
ILMN_2848071 66.465625 0.16917

Total number of rows: 25697

Table truncated, full table size 750 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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