NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1068390 Query DataSets for GSM1068390
Status Public on May 01, 2013
Title dt_48 weeks_non-fasted_rep_3 [muscle]
Sample type RNA
 
Source name muscle
Organism Mus musculus
Characteristics age: 48 weeks
fasting status: non-fasted
strain: C57BL/6J
diet: D12492
tissue: muscle
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Standard Illumina labeling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Sample name: 45M
Data processing The data were quantile normalised using lumi library in R
 
Submission date Jan 23, 2013
Last update date May 01, 2013
Contact name Krzysztof Goryca
Organization name Uniwersytet Warszawski
Department CeNT
Street address Banacha 2c
City Warszawa
ZIP/Postal code 02-097
Country Poland
 
Platform ID GPL6885
Series (1)
GSE43691 Hepatic molecular alterations more than muscle's differentiate obese hyperphagic mice from those prolonged fed with the high-fat diet

Data table header descriptions
ID_REF
VALUE quantile normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 5058.0875 0
ILMN_2721178 1169.102083 0
ILMN_3033922 904.61875 0
ILMN_3092673 2912.241667 0
ILMN_2816356 116.1166667 0.00251
ILMN_2808939 133.9770833 0
ILMN_2634564 534.55 0
ILMN_2737647 71.49375 0.10025
ILMN_2734484 779.3145833 0
ILMN_2952292 84.27395833 0.02632
ILMN_2699078 55.94791667 0.59273
ILMN_1213681 499.3708333 0
ILMN_2735413 57.77916667 0.48747
ILMN_2735415 80.62083333 0.04261
ILMN_2891688 760.3395833 0
ILMN_2637698 525.20625 0
ILMN_2674228 230.45 0
ILMN_2601546 68.46354167 0.1416
ILMN_1230831 60.04375 0.39348
ILMN_2848071 69.3625 0.13158

Total number of rows: 25697

Table truncated, full table size 753 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap