|
Status |
Public on Dec 09, 2013 |
Title |
Retinoic acid treated six hour post fertilization embryo rep 2 |
Sample type |
RNA |
|
|
Source name |
Retinoic acid treated_6 hr post fertilization embryo
|
Organism |
Danio rerio |
Characteristics |
tissue: whole embryo developmental stage: 6 hr post fertilization treated with: Retinoic acid
|
Extracted molecule |
total RNA |
Extraction protocol |
Trizol - following manufactor protocols
|
Label |
biotin
|
Label protocol |
Followed standard Affymetric protocols for chip type
|
|
|
Hybridization protocol |
Followed standard Affymetric protocols for chip type
|
Scan protocol |
Followed standard Affymetric protocols for chip type
|
Description |
6hRA_2
|
Data processing |
CEL files were normalized using invariant set and background corrected by mas5 using expresso from the R affy package (v.2.15.2).
|
|
|
Submission date |
Jan 25, 2013 |
Last update date |
Dec 09, 2013 |
Contact name |
Steven Weicksel |
E-mail(s) |
steven.weicksel@umassmed.edu
|
Organization name |
UMass Medical School
|
Department |
BMP
|
Lab |
Sagerstrom
|
Street address |
55 Lake Ave
|
City |
Worcester |
State/province |
Massachusetts |
ZIP/Postal code |
01605 |
Country |
USA |
|
|
Platform ID |
GPL1319 |
Series (2) |
GSE43755 |
Expression data from early zebrafish embryos either untreated or treated with retinoic acid |
GSE43758 |
Identification of nucleosome positions at hox TSSs during zebrafish early embryonic development |
|