|
| Status |
Public on Dec 09, 2013 |
| Title |
Retinoic acid treated nine hour post fertilization embryo rep 1 |
| Sample type |
RNA |
| |
|
| Source name |
Retinoic acid treated_9 hr post fertilization embryo
|
| Organism |
Danio rerio |
| Characteristics |
tissue: whole embryo
developmental stage: 9 hr post fertilization
treated with: Retinoic acid
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Trizol - following manufactor protocols
|
| Label |
biotin
|
| Label protocol |
Followed standard Affymetric protocols for chip type
|
| |
|
| Hybridization protocol |
Followed standard Affymetric protocols for chip type
|
| Scan protocol |
Followed standard Affymetric protocols for chip type
|
| Description |
9hRA_1
|
| Data processing |
CEL files were normalized using invariant set and background corrected by mas5 using expresso from the R affy package (v.2.15.2).
|
| |
|
| Submission date |
Jan 25, 2013 |
| Last update date |
Dec 09, 2013 |
| Contact name |
Steven Weicksel |
| E-mail(s) |
steven.weicksel@umassmed.edu
|
| Organization name |
UMass Medical School
|
| Department |
BMP
|
| Lab |
Sagerstrom
|
| Street address |
55 Lake Ave
|
| City |
Worcester |
| State/province |
Massachusetts |
| ZIP/Postal code |
01605 |
| Country |
USA |
| |
|
| Platform ID |
GPL1319 |
| Series (2) |
| GSE43755 |
Expression data from early zebrafish embryos either untreated or treated with retinoic acid |
| GSE43758 |
Identification of nucleosome positions at hox TSSs during zebrafish early embryonic development |
|
