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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Feb 20, 2008 |
| Title |
Stria Vascularis Knockout (Pendrin)-1 |
| Sample type |
RNA |
| |
|
| Source name |
Stria Vascularis RNA
|
| Organism |
Mus musculus |
| Characteristics |
Strain 129S6, Age 150 days, Tissue Ear
|
| Extracted molecule |
total RNA |
| Label |
streptavidin
|
| |
|
| Description |
Stria Vascularis was isolated from the mouse cochlea, RNA was isolated and hybridized on Affymetrix mouse 430.2
|
| Data processing |
Raw data, normalized and scaled in GCOS
|
| |
|
| Submission date |
May 01, 2006 |
| Last update date |
Feb 20, 2008 |
| Contact name |
Philine Wangemann |
| E-mail(s) |
wange@vet.ksu.edu
|
| Phone |
785-532-4863
|
| Organization name |
Kansas State University
|
| Department |
Anatomy and Physiology
|
| Lab |
Cell Physiology Laboratory
|
| Street address |
1600 Dension Avenue
|
| City |
Manhattan |
| State/province |
KS |
| ZIP/Postal code |
66506 |
| Country |
USA |
| |
|
| Platform ID |
GPL1261 |
| Series (1) |
| GSE4749 |
Microarray based comparison of gene expression in stria vascularis of 129S6 mice lacking slc26a4 and wildtype controls |
|
| Data table header descriptions |
| ID_REF |
|
| VALUE |
Average Intensity |
| ABS_CALL |
Present, Marginal, Absent |
| DETECTION P-VALUE |
p-value |
| Data table |
| ID_REF |
VALUE |
ABS_CALL |
DETECTION P-VALUE |
| AFFX-BioB-5_at |
354.2 |
P |
0.002556 |
| AFFX-BioB-M_at |
341 |
P |
0.001102 |
| AFFX-BioB-3_at |
234 |
P |
0.000972 |
| AFFX-BioC-5_at |
882.8 |
P |
0.000127 |
| AFFX-BioC-3_at |
611.1 |
P |
0.00007 |
| AFFX-BioDn-5_at |
925.9 |
P |
0.000052 |
| AFFX-BioDn-3_at |
3398.2 |
P |
0.000081 |
| AFFX-CreX-5_at |
10804.1 |
P |
0.000052 |
| AFFX-CreX-3_at |
12027 |
P |
0.000044 |
| AFFX-DapX-5_at |
21.4 |
A |
0.327079 |
| AFFX-DapX-M_at |
30.5 |
A |
0.262827 |
| AFFX-DapX-3_at |
7 |
A |
0.916408 |
| AFFX-LysX-5_at |
3 |
A |
0.876428 |
| AFFX-LysX-M_at |
27.5 |
A |
0.440646 |
| AFFX-LysX-3_at |
21.2 |
A |
0.227636 |
| AFFX-PheX-5_at |
6.1 |
A |
0.824672 |
| AFFX-PheX-M_at |
2.1 |
A |
0.966323 |
| AFFX-PheX-3_at |
21.5 |
A |
0.52976 |
| AFFX-ThrX-5_at |
13 |
A |
0.737173 |
| AFFX-ThrX-M_at |
28.6 |
A |
0.52976 |
Total number of rows: 45101
Table truncated, full table size 1219 Kbytes.
| Supplementary data files not provided |
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