|
Status |
Public on Feb 05, 2013 |
Title |
XENO AdVP16hLXRa (LXRa) 11 |
Sample type |
RNA |
|
|
Source name |
Xenograft Tumors (human HT29 cells) grown in Nu/Nu Athymic Female Mice
|
Organism |
Homo sapiens |
Characteristics |
cell type (human): Xenograft Tumors (HT29 cells) strain (mouse): Nu/Nu age (mouse): 4 months infection (mouse): LXRa (VP16hLXRa) Adenovirus
|
Extracted molecule |
total RNA |
Extraction protocol |
RNA was extracted with QIAzol reagent, following manufacturer's instructions. Quality control was performed with Biorad Experion.
|
Label |
biotin
|
Label protocol |
Biotinylated cRNA were prepared with the Ambion Illumina® TotalPrepTM RNA Amplification Kit
|
|
|
Hybridization protocol |
Standard Illumina hybridization protocol
|
Scan protocol |
Standard Illumina scanning protocol
|
Description |
XENO AdVP16hLXRa (LXRa) 11 replicate 1 human HT29 cells grown in Nu/Nu mice infected with LXRa (VP16hLXRa) Adenovirus
|
Data processing |
The data were normalised using quantile normalization with Illumina Genome Studio Software; items with detection p values >0.001 or AVG Signal <100 in both groups were excluded.
|
|
|
Submission date |
Feb 05, 2013 |
Last update date |
Feb 05, 2013 |
Contact name |
Antonio Moschetta |
Organization name |
University of Bari & Consorzio Mario Negri Sud
|
Street address |
Via Nazionale 8A
|
City |
Santa Maria Imbaro |
ZIP/Postal code |
66030 |
Country |
Italy |
|
|
Platform ID |
GPL10558 |
Series (2) |
GSE44068 |
Genome-wide analysis of gene expression profile of Xenograft Tumors (HT29 cells) grown in Nu/Nu Athymic Female Mice infected with Control (Ad-VP16) or LXRa (VP16hLXRa) Adenovirus |
GSE44073 |
Liver X Receptors play an antitumoral role in the intestine |
|