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Status
Public on Jun 06, 2006
Title
E10.5 craniofacial tissue, first branchial arch: WT_MXA-3_e1_le1
Sample type
RNA
Source name
E10.5 craniofacial tissue, first branchial arch
Organism
Mus musculus
Extracted molecule
total RNA
Description
We will separately dissect the maxillary and mandibular branches of the E10.5 first branchial arch from wild type, dlx2, dlx1/2 and Dlx5/6 mutants. The tissues wil be flash frozen within 1 min of removal.We have not performed the dissections yet so we dont know how much RNA will be get from each sample, but previous experience suggests that we will need ~10 branchial arches/experiment. Treatment, type=nucleic_acid_extraction, description=We anticipate using this method as it was recommended by TGEN for small amounts of tissue.
Submission date
May 04, 2006
Last update date
Aug 28, 2018
Contact name
Winnie Liang
E-mail(s)
wliang@tgen.org
Organization name
Translational Genomics
Street address
445 N. Fifth Street
City
Phoenix
State/province
AZ
ZIP/Postal code
85012
Country
USA
Platform ID
GPL1261
Series (1)
Relations
Reanalyzed by
GSE119085
Data table header descriptions
ID_REF
The name of the probe set, blank for control probes
VALUE
The signal value calculated by MAS 5 or GCOS software.
ABS_CALL
The detection value calculated by the MAS 5 or GCOS software
DETECTION P-VALUE
The detection p-value calculated by the MAS 5 or GCOS software
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
179.21239
P
0.000081
AFFX-BioB-M_at
275.0565
P
0.000052
AFFX-BioB-3_at
157.05461
P
0.000060
AFFX-BioC-5_at
613.14545
P
0.000044
AFFX-BioC-3_at
618.8596
P
0.000044
AFFX-BioDn-5_at
1270.8055
P
0.000044
AFFX-BioDn-3_at
2301.8308
P
0.000044
AFFX-CreX-5_at
5798.911
P
0.000052
AFFX-CreX-3_at
7198.61
P
0.000044
AFFX-DapX-5_at
168.03822
P
0.000095
AFFX-DapX-M_at
364.17944
P
0.000509
AFFX-DapX-3_at
480.7881
P
0.000052
AFFX-LysX-5_at
27.928436
P
0.002023
AFFX-LysX-M_at
59.883457
P
0.001796
AFFX-LysX-3_at
94.04331
P
0.000258
AFFX-PheX-5_at
41.71569
P
0.000581
AFFX-PheX-M_at
35.101097
P
0.000509
AFFX-PheX-3_at
65.602
P
0.000662
AFFX-ThrX-5_at
51.406937
P
0.000225
AFFX-ThrX-M_at
60.53052
P
0.000127
Total number of rows: 45101 Table truncated, full table size 1413 Kbytes .Supplementary file
Size
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File type/resource
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