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Status
Public on Jun 06, 2006
Title
E10.5 craniofacial tissue, first branchial arch: WT_MXA2-1_e1_le1
Sample type
RNA
Source name
E10.5 craniofacial tissue, first branchial arch
Organism
Mus musculus
Extracted molecule
total RNA
Description
We will separately dissect the maxillary and mandibular branches of the E10.5 first branchial arch from wild type, dlx2, dlx1/2 and Dlx5/6 mutants. The tissues wil be flash frozen within 1 min of removal.We have not performed the dissections yet so we dont know how much RNA will be get from each sample, but previous experience suggests that we will need ~10 branchial arches/experiment. Treatment, type=nucleic_acid_extraction, description=We anticipate using this method as it was recommended by TGEN for small amounts of tissue.
Submission date
May 04, 2006
Last update date
Aug 28, 2018
Contact name
Winnie Liang
E-mail(s)
wliang@tgen.org
Organization name
Translational Genomics
Street address
445 N. Fifth Street
City
Phoenix
State/province
AZ
ZIP/Postal code
85012
Country
USA
Platform ID
GPL1261
Series (1)
Relations
Reanalyzed by
GSE119085
Data table header descriptions
ID_REF
The name of the probe set, blank for control probes
VALUE
The signal value calculated by MAS 5 or GCOS software.
ABS_CALL
The detection value calculated by the MAS 5 or GCOS software
DETECTION P-VALUE
The detection p-value calculated by the MAS 5 or GCOS software
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
152.47495
P
0.000754
AFFX-BioB-M_at
226.44972
P
0.000044
AFFX-BioB-3_at
157.35014
P
0.000044
AFFX-BioC-5_at
558.5069
P
0.000044
AFFX-BioC-3_at
648.68085
P
0.000044
AFFX-BioDn-5_at
1272.3218
P
0.000044
AFFX-BioDn-3_at
2320.4922
P
0.000044
AFFX-CreX-5_at
5974.715
P
0.000052
AFFX-CreX-3_at
8066.5645
P
0.000044
AFFX-DapX-5_at
1433.084
P
0.000044
AFFX-DapX-M_at
2648.3613
P
0.000052
AFFX-DapX-3_at
3611.7004
P
0.000044
AFFX-LysX-5_at
246.73509
P
0.000044
AFFX-LysX-M_at
350.1258
P
0.000044
AFFX-LysX-3_at
688.273
P
0.000052
AFFX-PheX-5_at
323.69006
P
0.000044
AFFX-PheX-M_at
485.57294
P
0.000044
AFFX-PheX-3_at
459.9742
P
0.000044
AFFX-ThrX-5_at
300.423
P
0.000070
AFFX-ThrX-M_at
547.91565
P
0.000044
Total number of rows: 45101 Table truncated, full table size 1414 Kbytes .Supplementary file
Size
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File type/resource
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CEL