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Sample GSM108312 Query DataSets for GSM108312
Status Public on May 11, 2006
Title SSC GDNF/GFRalpha1 Rep3
Sample type RNA
 
Source name Cultured mouse spermatogonial stem cells
Organism Mus musculus
Characteristics Spermatogonial stem cell enriched germ cell cultures established from 6 day old C57BL/6 male mice.
Treatment protocol Spermatogonial stem cells maintained in the presence of GDNF and GFRalpha1.
Replicate 3
Extracted molecule total RNA
Label PE
 
Description Spermatogonial stem cells cultured with GDNF, GFRalpha1, and bFGF.
Replicate 3
Total RNA from spermatogonial stem cell enriched germ cell cultures that were established from 6 day old C57BL/6 male mice. Cultures were continually maintained in a serum-free, defined media with GDNF, GFRalpha1 and bFGF.
Data processing MAS 5.0, signal intensities scaled to a mean value of 150
 
Submission date May 09, 2006
Last update date May 10, 2006
Contact name Jon Oatley
E-mail(s) jmo15@psu.edu
Organization name Pennsylvania State University
Department Dairy and Animal Science
Street address 324 Henning
City University Park
State/province PA
ZIP/Postal code 16802
Country USA
 
Platform ID GPL1261
Series (1)
GSE4799 GDNF-regulated gene expression in cultured mouse spermatogonial stem cells

Data table header descriptions
ID_REF
VALUE Signal
ABS_CALL Absolute call, present (P), absent (A), marginal (M)
DETECTION P-VALUE Absolute call p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-TrpnX-M_at 2.6 A 0.883908
AFFX-TrpnX-5_at 4 A 0.41138
AFFX-TrpnX-3_at 1.5 A 0.631573
AFFX-TransRecMur/X57349_M_at 155.9 P 0.00039
AFFX-TransRecMur/X57349_5_at 197.7 P 0.000662
AFFX-TransRecMur/X57349_3_at 631.7 P 0.000052
AFFX-ThrX-M_at 91 P 0.000225
AFFX-ThrX-5_at 55.6 P 0.00141
AFFX-ThrX-3_at 152.3 P 0.000581
AFFX-r2-P1-cre-5_at 12849.5 P 0.000244
AFFX-r2-P1-cre-3_at 17052.7 P 0.000244
AFFX-r2-Ec-bioD-5_at 6125 P 0.000244
AFFX-r2-Ec-bioD-3_at 7308.4 P 0.000244
AFFX-r2-Ec-bioC-5_at 1259.3 P 0.000244
AFFX-r2-Ec-bioC-3_at 1404.4 P 0.000244
AFFX-r2-Ec-bioB-M_at 515.9 P 0.000244
AFFX-r2-Ec-bioB-5_at 427 P 0.000244
AFFX-r2-Ec-bioB-3_at 545.7 P 0.000244
AFFX-r2-Bs-thr-M_s_at 199 P 0.008057
AFFX-r2-Bs-thr-5_s_at 116 P 0.000732

Total number of rows: 45101

Table truncated, full table size 1196 Kbytes.




Supplementary data files not provided

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