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Sample GSM1094106 Query DataSets for GSM1094106
Status Public on Mar 01, 2014
Title E10.5_25RHS
Sample type RNA
 
Source name Brain of E10.5 dpc right hemispheres mouse embryo replicate2
Organism Mus musculus
Characteristics tissue: brain
Stage: E10.5
hemisphere: right
strain: (C3H/HeH x 101/H)F1
Treatment protocol Brain Right/left Heamispheres were separated along the midline dissected from mouse embryonic head
Extracted molecule total RNA
Extraction protocol QIAGEN Rneasy kit were used for Total RNA extraction
Label Biotin
Label protocol Illumina TotalPrep-96 RNA Amplification kit from Ambion # 4393543 used
 
Hybridization protocol Illumina Direct Hybridization Assay used for Whole-genome gene expression profilling
Scan protocol Illumina BeadArray Reader used to capture immages with default setting
Description Brain of E10.5 dpc right hemispheres mouse embryo replicate2
Data processing Illumina GenomeStudio were used to generate raw non-normalized data
Illumina GenomeStudio were used to generate background subtracted normalized data
 
Submission date Mar 06, 2013
Last update date Mar 01, 2014
Contact name Dilair Baban
E-mail(s) dilair.baban@well.ox.ac.uk
Phone +44(0)1865287521
Organization name University of Oxford
Department Wellcome Trust Centre Human Genetics
Lab Genomics
Street address Roosevelt Drive
City Oxford
ZIP/Postal code OX3 7BN
Country United Kingdom
 
Platform ID GPL6481
Series (1)
GSE44932 A chronological expression profile of gene activity during embryonic mouse brain development

Data table header descriptions
ID_REF
VALUE Illumina GenomeStudio were used to generate background subtracted normalized data
FLAG
Detection_score

Data table
ID_REF VALUE FLAG Detection_score
102450270 -0.1 A 0.60574
104200035 -9.9 A 0.19838
100730138 8.1 A 0.81347
104230390 27.6 A 0.96444
102630735 -7.2 A 0.28696
100450435 11.2 A 0.86213
101230594 -19.6 A 0.01747
100780541 -4.4 A 0.40986
104200184 -15.5 A 0.05365
105360286 -2 A 0.52527
103060411 -1.6 A 0.5446
100630193 -16.3 A 0.04554
105270286 -13.1 A 0.10543
101690685 -12.8 A 0.10979
100060180 4.9 A 0.74361
107100563 -6.5 A 0.32065
100450451 -6 A 0.33936
100610092 -17.3 A 0.03182
104810452 31685.1 P 1
6840019 7757.9 P 1

Total number of rows: 46643

Table truncated, full table size 1049 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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