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Sample GSM1094110 Query DataSets for GSM1094110
Status Public on Mar 01, 2014
Title E8.5_16RHS
Sample type RNA
 
Source name Brain of E8.5 dpc right hemispheres mouse embryo replicate4
Organism Mus musculus
Characteristics tissue: brain
Stage: E8.5
hemisphere: right
strain: (C3H/HeH x 101/H)F1
Treatment protocol Brain Right/left Heamispheres were separated along the midline dissected from mouse embryonic head
Extracted molecule total RNA
Extraction protocol QIAGEN Rneasy kit were used for Total RNA extraction
Label Biotin
Label protocol Illumina TotalPrep-96 RNA Amplification kit from Ambion # 4393543 used
 
Hybridization protocol Illumina Direct Hybridization Assay used for Whole-genome gene expression profilling
Scan protocol Illumina BeadArray Reader used to capture immages with default setting
Description Brain of E8.5 dpc right hemispheres mouse embryo replicate4
Data processing Illumina GenomeStudio were used to generate raw non-normalized data
Illumina GenomeStudio were used to generate background subtracted normalized data
 
Submission date Mar 06, 2013
Last update date Mar 01, 2014
Contact name Dilair Baban
E-mail(s) dilair.baban@well.ox.ac.uk
Phone +44(0)1865287521
Organization name University of Oxford
Department Wellcome Trust Centre Human Genetics
Lab Genomics
Street address Roosevelt Drive
City Oxford
ZIP/Postal code OX3 7BN
Country United Kingdom
 
Platform ID GPL6481
Series (1)
GSE44932 A chronological expression profile of gene activity during embryonic mouse brain development

Data table header descriptions
ID_REF
VALUE Illumina GenomeStudio were used to generate background subtracted normalized data
FLAG
Detection_score

Data table
ID_REF VALUE FLAG Detection_score
102450270 -0.9 A 0.58266
104200035 -5.4 A 0.43668
100730138 16.4 A 0.87586
104230390 23.2 A 0.92327
102630735 -7 A 0.38428
100450435 12.6 A 0.83593
101230594 -17.1 A 0.09919
100780541 -1.1 A 0.57642
104200184 -13.5 A 0.18153
105360286 -6.6 A 0.39738
103060411 -3 A 0.51591
100630193 -24.4 A 0.0156
105270286 -12.5 A 0.21148
101690685 -15.9 A 0.12477
100060180 0.7 A 0.62445
107100563 -5.3 A 0.4423
100450451 -11.5 A 0.23706
100610092 -17.4 A 0.09607
104810452 25146.7 P 1
6840019 443.7 P 1

Total number of rows: 46643

Table truncated, full table size 1061 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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