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Sample GSM1094114 Query DataSets for GSM1094114
Status Public on Mar 01, 2014
Title E12.5_17RHS
Sample type RNA
 
Source name Brain of E12.5 dpc righthemispheres mouse embryo replicate4
Organism Mus musculus
Characteristics tissue: brain
Stage: E12.5
hemisphere: right
strain: (C3H/HeH x 101/H)F1
Treatment protocol Brain Right/left Heamispheres were separated along the midline dissected from mouse embryonic head
Extracted molecule total RNA
Extraction protocol QIAGEN Rneasy kit were used for Total RNA extraction
Label Biotin
Label protocol Illumina TotalPrep-96 RNA Amplification kit from Ambion # 4393543 used
 
Hybridization protocol Illumina Direct Hybridization Assay used for Whole-genome gene expression profilling
Scan protocol Illumina BeadArray Reader used to capture immages with default setting
Description Brain of E12.5 dpc righthemispheres mouse embryo replicate4
Data processing Illumina GenomeStudio were used to generate raw non-normalized data
Illumina GenomeStudio were used to generate background subtracted normalized data
 
Submission date Mar 06, 2013
Last update date Mar 01, 2014
Contact name Dilair Baban
E-mail(s) dilair.baban@well.ox.ac.uk
Phone +44(0)1865287521
Organization name University of Oxford
Department Wellcome Trust Centre Human Genetics
Lab Genomics
Street address Roosevelt Drive
City Oxford
ZIP/Postal code OX3 7BN
Country United Kingdom
 
Platform ID GPL6481
Series (1)
GSE44932 A chronological expression profile of gene activity during embryonic mouse brain development

Data table header descriptions
ID_REF
VALUE Illumina GenomeStudio were used to generate background subtracted normalized data
FLAG
Detection_score

Data table
ID_REF VALUE FLAG Detection_score
102450270 7.8 A 0.79663
104200035 -6 A 0.35496
100730138 12.7 A 0.86775
104230390 21.3 A 0.93512
102630735 -6.1 A 0.35246
100450435 6.7 A 0.77043
101230594 -15.4 A 0.06737
100780541 -5.1 A 0.398
104200184 -14.9 A 0.08047
105360286 -16.5 A 0.05303
103060411 3.7 A 0.70555
100630193 -24.4 A 0.00624
105270286 -15.6 A 0.06613
101690685 -21.3 A 0.01747
100060180 3.8 A 0.70742
107100563 -11.5 A 0.15908
100450451 -11.9 A 0.14972
100610092 -18.7 A 0.03556
104810452 27969 P 1
6840019 600.7 P 1

Total number of rows: 46643

Table truncated, full table size 1056 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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