NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1094123 Query DataSets for GSM1094123
Status Public on Mar 01, 2014
Title E10.5_15LHS
Sample type RNA
 
Source name Brain of E10.5 dpc left hemispheres mouse embryo replicate3
Organism Mus musculus
Characteristics tissue: brain
Stage: E10.5
hemisphere: left
strain: (C3H/HeH x 101/H)F1
Treatment protocol Brain Right/left Heamispheres were separated along the midline dissected from mouse embryonic head
Extracted molecule total RNA
Extraction protocol QIAGEN Rneasy kit were used for Total RNA extraction
Label Biotin
Label protocol Illumina TotalPrep-96 RNA Amplification kit from Ambion # 4393543 used
 
Hybridization protocol Illumina Direct Hybridization Assay used for Whole-genome gene expression profilling
Scan protocol Illumina BeadArray Reader used to capture immages with default setting
Description Brain of E10.5 dpc left hemispheres mouse embryo replicate3
Data processing Illumina GenomeStudio were used to generate raw non-normalized data
Illumina GenomeStudio were used to generate background subtracted normalized data
 
Submission date Mar 06, 2013
Last update date Mar 01, 2014
Contact name Dilair Baban
E-mail(s) dilair.baban@well.ox.ac.uk
Phone +44(0)1865287521
Organization name University of Oxford
Department Wellcome Trust Centre Human Genetics
Lab Genomics
Street address Roosevelt Drive
City Oxford
ZIP/Postal code OX3 7BN
Country United Kingdom
 
Platform ID GPL6481
Series (1)
GSE44932 A chronological expression profile of gene activity during embryonic mouse brain development

Data table header descriptions
ID_REF
VALUE Illumina GenomeStudio were used to generate background subtracted normalized data
FLAG
Detection_score

Data table
ID_REF VALUE FLAG Detection_score
102450270 -3.1 A 0.50343
104200035 0.5 A 0.62383
100730138 16.2 A 0.89083
104230390 29.4 A 0.95384
102630735 -10.4 A 0.22146
100450435 6.2 A 0.76482
101230594 -18.6 A 0.03993
100780541 -6.9 A 0.34872
104200184 -7.6 A 0.32502
105360286 -4.2 A 0.46351
103060411 -6.5 A 0.36245
100630193 -15.7 A 0.08671
105270286 -13.2 A 0.14286
101690685 -16.8 A 0.06925
100060180 0.6 A 0.62445
107100563 -12.1 A 0.16968
100450451 -16.1 A 0.07923
100610092 -18.9 A 0.03618
104810452 33833.3 P 1
6840019 3300.9 P 1

Total number of rows: 46643

Table truncated, full table size 1055 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap