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Sample GSM1094506 Query DataSets for GSM1094506
Status Public on Mar 09, 2013
Title WT Interferon (7991003040_G)
Sample type RNA
 
Source name HSC
Organism Mus musculus
Characteristics background mouse strain: C57B16
genotype: WT
treatment: Interferon
Treatment protocol Interferon 10,000 units per day for 4 weeks or vehicle control
Growth protocol In vivo isolation
Extracted molecule total RNA
Extraction protocol Invitrogen PicoPure extraction kit
Label Biotin
Label protocol Illumina® TotalPrep™ RNA Amplification Kit according to protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description WT Interferon
Data processing Gene Pattern (Broad Institute) software, Illumina module, Quantile normalization
 
Submission date Mar 07, 2013
Last update date Mar 11, 2013
Contact name Steven Lane
Organization name QIMR
Street address 300 Herston Rd
City Brisbane
ZIP/Postal code 4064
Country Australia
 
Platform ID GPL6885
Series (1)
GSE44961 Depletion of Jak2V617F MPN-propagating stem cells by interferon-alpha in a murine model of polycythemia vera

Data table header descriptions
ID_REF
VALUE average intensities
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 3131.751 0
ILMN_2721178 735.1603 0
ILMN_3033922 615.128 0
ILMN_3092673 2813.286 0
ILMN_2816356 144.7689 0
ILMN_2808939 1398.62 0
ILMN_2634564 561.2025 0
ILMN_2737647 104.5043 0.3659148
ILMN_2734484 861.0543 0
ILMN_2952292 204.891 0
ILMN_2699078 111.7601 0.1491228
ILMN_1213681 479.7775 0
ILMN_2735413 94.68351 0.7669173
ILMN_2735415 111.1571 0.1578947
ILMN_2891688 1193.007 0
ILMN_2637698 980.9987 0
ILMN_2674228 1019.738 0
ILMN_2601546 115.5253 0.0877193
ILMN_1230831 99.58506 0.5726817
ILMN_2848071 118.9393 0.05137845

Total number of rows: 25697

Table truncated, full table size 718 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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