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Sample GSM10959 Query DataSets for GSM10959
Status Public on Oct 04, 2003
Title CVB3_V-3h-1
Sample type RNA
 
Source name HeLa cell lysate infected with CVB3
Organism Homo sapiens
Extracted molecule total RNA
 
Description Human cervical carcinoma cells (HeLa cells; American-Type Culture Collection) were cultured in a 10 cm tissue culture plate. Cells were exposed to DMSO overnight and infected with coxsackievirus B3 (multiplicity of infection=10) for 45 min under serum-free conditions. Following infection, virus was removed and fresh media containing 10% fetal bovine serum was added for the remainder of the infectious process. At 3 hours following infection, cells were scraped into 1ml ice cold PBS and spun at 1000 rpm for 10 minutes. Supernatant was removed and cells lysates were flash frozen in liquid nitrogen. Subsequently, RNA was isolated, processed, and hybridized to Affymetrix U95A arrays.
 
Submission date Oct 03, 2003
Last update date Mar 16, 2009
Contact name Bruce Maxwell McManus
E-mail(s) Bruce.McManus@hli.ubc.ca
Phone 604-806-8586
Organization name PROOF Centre of Excellence
Department UBC James Hogg Research Centre
Street address 1081 Burrard Street
City Vancouver
State/province BC
ZIP/Postal code V6Z 1Y6
Country Canada
 
Platform ID GPL8300
Series (1)
GSE697 CVB3-infected HeLa cells (multiple time points and triplicate sample per time point)

Data table header descriptions
ID_REF
VALUE Raw signal intensity values from Affymetrix MAS 5.0
ABS_CALL Present/Absent/Marginal call as determined in MAS 5.0

Data table
ID_REF VALUE ABS_CALL
31307_at 7 A
31308_at 21 A
31309_r_at 37.5 A
31310_at 23.9 A
31311_at 20.4 A
31312_at 88.9 A
31313_at 150.3 A
31314_at 197.5 A
31315_at 203.6 A
31316_at 11 A
31317_r_at 261.9 A
31318_at 6.4 A
31319_at 39 A
31320_at 933 A
31321_at 120.1 A
31322_at 9.5 A
31323_r_at 66.9 A
31324_at 214.5 A
31325_at 37.9 A
31326_at 164.7 A

Total number of rows: 12558

Table truncated, full table size 207 Kbytes.




Supplementary data files not provided

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