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Sample GSM110381 Query DataSets for GSM110381
Status Public on Jun 28, 2006
Title esophageal squamous cell carcinoma
Sample type SAGE
Anchor NlaIII
Tag Count 24922
Tag Length 10
 
Source name esophageal squamous cell carcinoma
Organism Homo sapiens
Characteristics esophageal squamous cell carcinoma
Extracted molecule total RNA
 
Description SAGE data of esophageal squamous cell carcinoma biopsy
 
Submission date May 24, 2006
Last update date Nov 19, 2008
Contact name Jantine Wilhelmina Paula Maria van Baal
E-mail(s) j.w.p.m.vanbaal-2@umcutrecht.nl
Phone +31 88 7556279
Fax +31 88 7555533
Organization name University Medical Center Utrecht
Department Gastroenterology and Hepatology
Lab Gastroenterology and Hepatology
Street address Heidelberglaan 100
City Utrecht
ZIP/Postal code 3584 CX
Country Netherlands
 
Platform ID GPL4
Series (1)
GSE5154 Squamous esophagus

Data table header descriptions
TAG Tag
COUNT count
TPM tags per million

Data table
TAG COUNT TPM
TACCTGCAGA 675 27084.50
AGAAAGATGT 528 21186.10
TTTCCTGCTC 445 17855.71
TCCCCGTACA 428 17173.58
GTGGCCACGG 269 10793.68
GTTGTGGTTA 260 10432.55
ATCCTTGCTG 211 8466.42
TCCCTATTAA 189 7583.66
CCCATCGTCC 187 7503.41
CTAAGACTTC 175 7021.91
ATAATTCTTT 162 6500.28
CACCTAATTG 160 6420.03
AAAGCACAAG 140 5617.53
GGCAGAGAAG 132 5296.53
GCATAATAGG 122 4895.27
TTGGGGTTTC 121 4855.15
TAGGTTGTCT 117 4694.65
ACTTTTTCAA 108 4333.52
GAGGGAGTTT 100 4012.52
TTCATACACC 96 3852.02

Total number of rows: 8636

Table truncated, full table size 162 Kbytes.




Supplementary data files not provided

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