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Sample GSM1110210 Query DataSets for GSM1110210
Status Public on May 01, 2013
Title KO embryo at E15.5 rep 1
Sample type RNA
Source name KO mouse adrenals at E15.5
Organism Mus musculus
Characteristics strain background: C57BL/6
genotype/variation: KO Sf1-Cre/Dicer lox/lox
developmental stage: E15.5
tissue: adrenals
Growth protocol Sf1-Cre/Dicerlox/lox mice, Sf1-Cre/Dicer+/lox and Dicerlox/lox mice were mated together. Females from each mating pair were monitored for seminal plugs, and the morning of detection was designated as E0.5.
Extracted molecule total RNA
Extraction protocol Total RNA was isolated using the RNAqueous Micro kit (Life Technologies, Carlsbad, CA) in accordance with the manufacturer’s protocol.
Label biotin
Label protocol standard Affymetrix protocol
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Description KO_E15.5-1
Gene expression data from KO mouse adrenals at E15.5
Data processing Microarray data were normalized using the robust multiarray average (RMA) algorithm (limma R package).
Submission date Mar 28, 2013
Last update date May 01, 2013
Contact name Katherine Gurdziel
Organization name Wayne State University
Street address 275 E. Hancock
City Detroit
State/province MI
ZIP/Postal code 48201
Country USA
Platform ID GPL1261
Series (2)
GSE45592 Dicer deficiency reveals microRNAs predicted to control gene expression in developing adrenal cortex [array]
GSE45812 Dicer deficiency reveals microRNAs predicted to control gene expression in developing adrenal cortex

Data table header descriptions
VALUE normalized signal intensities

Data table
1415670_at 9.761242697
1415671_at 10.76283568
1415672_at 12.00696078
1415673_at 8.636339196
1415674_a_at 9.862196086
1415675_at 9.769832983
1415676_a_at 12.17513472
1415677_at 8.977624954
1415678_at 10.82380211
1415679_at 11.28826902
1415680_at 9.593184195
1415681_at 10.31255348
1415682_at 8.011296967
1415683_at 11.30028348
1415684_at 8.848074167
1415685_at 9.625446983
1415686_at 10.24139168
1415687_a_at 11.69418421
1415688_at 10.95450193
1415689_s_at 9.538469959

Total number of rows: 45101

Table truncated, full table size 1026 Kbytes.

Supplementary file Size Download File type/resource
GSM1110210_Hammer_002R_Mouse430_2_.CEL.gz 3.7 Mb (ftp)(http) CEL
Raw data provided as supplementary file
Processed data included within Sample table

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