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Sample GSM1110211 Query DataSets for GSM1110211
Status Public on May 01, 2013
Title WT embryo at E15.5 rep 2
Sample type RNA
 
Source name WT mouse adrenals at E15.5
Organism Mus musculus
Characteristics strain background: C57BL/6
genotype/variation: WT
developmental stage: E15.5
tissue: adrenals
Growth protocol Sf1-Cre/Dicerlox/lox mice, Sf1-Cre/Dicer+/lox and Dicerlox/lox mice were mated together. Females from each mating pair were monitored for seminal plugs, and the morning of detection was designated as E0.5.
Extracted molecule total RNA
Extraction protocol Total RNA was isolated using the RNAqueous Micro kit (Life Technologies, Carlsbad, CA) in accordance with the manufacturer’s protocol.
Label biotin
Label protocol standard Affymetrix protocol
 
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Description WT_E15.5-2
Hammer_003_(Mouse430_2).CEL
Gene expression data from WT mouse adrenals at E15.5
Data processing Microarray data were normalized using the robust multiarray average (RMA) algorithm (limma R package).
 
Submission date Mar 28, 2013
Last update date May 01, 2013
Contact name Katherine Gurdziel
Organization name Wayne State University
Street address 275 E. Hancock
City Detroit
State/province MI
ZIP/Postal code 48201
Country USA
 
Platform ID GPL1261
Series (2)
GSE45592 Dicer deficiency reveals microRNAs predicted to control gene expression in developing adrenal cortex [array]
GSE45812 Dicer deficiency reveals microRNAs predicted to control gene expression in developing adrenal cortex

Data table header descriptions
ID_REF
VALUE normalized signal intensities

Data table
ID_REF VALUE
1415670_at 9.708416595
1415671_at 10.87747365
1415672_at 11.82306882
1415673_at 8.621730813
1415674_a_at 10.04753892
1415675_at 9.895379084
1415676_a_at 12.2489465
1415677_at 9.432377612
1415678_at 10.86220817
1415679_at 11.59330422
1415680_at 9.279508582
1415681_at 10.60467217
1415682_at 8.164825817
1415683_at 11.16603193
1415684_at 8.67232158
1415685_at 9.670206707
1415686_at 10.09863542
1415687_a_at 11.2865756
1415688_at 10.70496861
1415689_s_at 9.889988158

Total number of rows: 45101

Table truncated, full table size 1026 Kbytes.




Supplementary file Size Download File type/resource
GSM1110211_Hammer_003_Mouse430_2_.CEL.gz 3.6 Mb (ftp)(http) CEL
Raw data provided as supplementary file
Processed data included within Sample table

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