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Sample GSM1110215 Query DataSets for GSM1110215
Status Public on May 01, 2013
Title WT embryo at E15.5 rep 4
Sample type RNA
Source name WT mouse adrenals at E15.5
Organism Mus musculus
Characteristics strain background: C57BL/6
genotype/variation: WT
developmental stage: E15.5
tissue: adrenals
Growth protocol Sf1-Cre/Dicerlox/lox mice, Sf1-Cre/Dicer+/lox and Dicerlox/lox mice were mated together. Females from each mating pair were monitored for seminal plugs, and the morning of detection was designated as E0.5.
Extracted molecule total RNA
Extraction protocol Total RNA was isolated using the RNAqueous Micro kit (Life Technologies, Carlsbad, CA) in accordance with the manufacturer’s protocol.
Label biotin
Label protocol standard Affymetrix protocol
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Description WT_E15.5-4
Gene expression data from WT mouse adrenals at E15.5
Data processing Microarray data were normalized using the robust multiarray average (RMA) algorithm (limma R package).
Submission date Mar 28, 2013
Last update date May 01, 2013
Contact name Katherine Gurdziel
Organization name Wayne State University
Street address 275 E. Hancock
City Detroit
State/province MI
ZIP/Postal code 48201
Country USA
Platform ID GPL1261
Series (2)
GSE45592 Dicer deficiency reveals microRNAs predicted to control gene expression in developing adrenal cortex [array]
GSE45812 Dicer deficiency reveals microRNAs predicted to control gene expression in developing adrenal cortex

Data table header descriptions
VALUE normalized signal intensities

Data table
1415670_at 10.0438586
1415671_at 11.03535643
1415672_at 11.85010392
1415673_at 8.24342557
1415674_a_at 9.522475908
1415675_at 9.439059679
1415676_a_at 11.97112001
1415677_at 9.132102153
1415678_at 10.85453428
1415679_at 11.09060789
1415680_at 9.548844114
1415681_at 10.29930332
1415682_at 8.968075388
1415683_at 11.23232623
1415684_at 8.788509718
1415685_at 9.531521196
1415686_at 10.23759378
1415687_a_at 11.86033377
1415688_at 10.75999243
1415689_s_at 9.566149186

Total number of rows: 45101

Table truncated, full table size 1026 Kbytes.

Supplementary file Size Download File type/resource
GSM1110215_Hammer_007_Mouse430_2_.CEL.gz 3.6 Mb (ftp)(http) CEL
Raw data provided as supplementary file
Processed data included within Sample table

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