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Sample GSM1110217 Query DataSets for GSM1110217
Status Public on May 01, 2013
Title WT embryo at E16.5 rep 1
Sample type RNA
Source name WT mouse adrenals at E16.5
Organism Mus musculus
Characteristics strain background: C57BL/6
genotype/variation: WT
developmental stage: E16.5
tissue: adrenals
Growth protocol Sf1-Cre/Dicerlox/lox mice, Sf1-Cre/Dicer+/lox and Dicerlox/lox mice were mated together. Females from each mating pair were monitored for seminal plugs, and the morning of detection was designated as E0.5.
Extracted molecule total RNA
Extraction protocol Total RNA was isolated using the RNAqueous Micro kit (Life Technologies, Carlsbad, CA) in accordance with the manufacturer’s protocol.
Label biotin
Label protocol standard Affymetrix protocol
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Description WT_E16.5-1
Gene expression data from WT mouse adrenals at E16.5
Data processing Microarray data were normalized using the robust multiarray average (RMA) algorithm (limma R package).
Submission date Mar 28, 2013
Last update date May 01, 2013
Contact name Katherine Gurdziel
Organization name Wayne State University
Street address 275 E. Hancock
City Detroit
State/province MI
ZIP/Postal code 48201
Country USA
Platform ID GPL1261
Series (2)
GSE45592 Dicer deficiency reveals microRNAs predicted to control gene expression in developing adrenal cortex [array]
GSE45812 Dicer deficiency reveals microRNAs predicted to control gene expression in developing adrenal cortex

Data table header descriptions
VALUE normalized signal intensities

Data table
1415670_at 9.570939414
1415671_at 11.05909084
1415672_at 11.84819276
1415673_at 8.642888428
1415674_a_at 10.4285644
1415675_at 10.10302681
1415676_a_at 12.48949361
1415677_at 9.387542271
1415678_at 10.81801304
1415679_at 11.81141746
1415680_at 8.889660605
1415681_at 10.8266207
1415682_at 7.780643309
1415683_at 11.09807891
1415684_at 8.856781893
1415685_at 9.39059064
1415686_at 9.961077056
1415687_a_at 11.59698367
1415688_at 10.68007862
1415689_s_at 9.574731184

Total number of rows: 45101

Table truncated, full table size 1026 Kbytes.

Supplementary file Size Download File type/resource
GSM1110217_Hammer_009_Mouse430_2_.CEL.gz 3.6 Mb (ftp)(http) CEL
Raw data provided as supplementary file
Processed data included within Sample table

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