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Sample GSM111139 Query DataSets for GSM111139
Status Public on Apr 30, 2007
Title OMP-GFP homozygous 3
Sample type RNA
 
Source name Olfactory epithelium
Organism Mus musculus
Characteristics Strain- Mixed 129XC57Bl6
Gender- both male and female
Age -P11
Tissue- olfactory epithelium
Growth protocol Normal laboratory animal rearing conditions
Extracted molecule total RNA
Extraction protocol Using TRI reagent from Molecular Research Center Inc
Label Biotin-Streptavidin-Phycoerythrin
Label protocol According to the instructions for eukaryotic one cycle target labeling provided in the Affymetrix Gene Chip expression analysis technical manual
 
Hybridization protocol According to the instructions provided in the Affymetrix Gene Chip expression analysis technical manual
Scan protocol According to the instructions provided in the Affymetrix Gene Chip expression analysis technical manual
Description OE from mice homozygous for OMP-GFP
Data processing Using MAS 5.0, scaled to 500
 
Submission date May 25, 2006
Last update date Dec 12, 2006
Contact name Neeraja Sammeta
Organization name University of Kentucky
Department Physiology
Lab McClintock
Street address 800 Rose Street,
City Lexington
State/province KY
ZIP/Postal code 40536
Country USA
 
Platform ID GPL1261
Series (1)
GSE4927 Effect of OMP on gene expression in the olfactory epithelium

Data table header descriptions
ID_REF
VALUE signal intensity
ABS_CALL Present/Absent Call
DETECTION P-VALUE detection P-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 418.9 P 0.00039
AFFX-BioB-M_at 637.1 P 0.000044
AFFX-BioB-3_at 462 P 0.000052
AFFX-BioC-5_at 1508.8 P 0.000044
AFFX-BioC-3_at 1733.9 P 0.000044
AFFX-BioDn-5_at 3165.7 P 0.000044
AFFX-BioDn-3_at 6108.4 P 0.000052
AFFX-CreX-5_at 14222.9 P 0.000052
AFFX-CreX-3_at 17632.9 P 0.000044
AFFX-DapX-5_at 23 A 0.205732
AFFX-DapX-M_at 12.7 A 0.712257
AFFX-DapX-3_at 5.3 A 0.941572
AFFX-LysX-5_at 2.9 A 0.804734
AFFX-LysX-M_at 17.4 A 0.51489
AFFX-LysX-3_at 13 A 0.368438
AFFX-PheX-5_at 7.3 A 0.617401
AFFX-PheX-M_at 2.3 A 0.945787
AFFX-PheX-3_at 30.6 A 0.368438
AFFX-ThrX-5_at 5 A 0.852082
AFFX-ThrX-M_at 14.5 A 0.425962

Total number of rows: 45101

Table truncated, full table size 1219 Kbytes.




Supplementary data files not provided

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