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Sample GSM111142 Query DataSets for GSM111142
Status Public on Apr 30, 2007
Title OMP-GFP heterozygous 3
Sample type RNA
 
Source name Olfactory epithelium
Organism Mus musculus
Characteristics strain - mixed 129XC57Bl6
Gender- both male and female
Age- P11
Tissue- Olfactory epithelium
Growth protocol Normal laboratory animal rearing conditions
Extracted molecule total RNA
Extraction protocol Using TRI reagent from Molecular Research Center Inc
Label Biotin-Streptavidin-Phycoerythrin
Label protocol According to the instructions for eukaryotic one cycle target labeling provided in the Affymetrix Gene Chip expression analysis technical manual
 
Hybridization protocol According to the instructions provided in the Affymetrix Gene Chip expression analysis technical manual
Scan protocol According to the instructions provided in the Affymetrix Gene Chip expression analysis technical manual
Description OE from mice heterozygous for OMP-GFP
Data processing Using MAS 5.0, scaled to 500
 
Submission date May 25, 2006
Last update date Dec 12, 2006
Contact name Neeraja Sammeta
Organization name University of Kentucky
Department Physiology
Lab McClintock
Street address 800 Rose Street,
City Lexington
State/province KY
ZIP/Postal code 40536
Country USA
 
Platform ID GPL1261
Series (1)
GSE4927 Effect of OMP on gene expression in the olfactory epithelium

Data table header descriptions
ID_REF
VALUE Signal intensity
ABS_CALL Present/Absent Call
DETECTION P-VALUE Detection P-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 545.9 P 0.000225
AFFX-BioB-M_at 694.8 P 0.000044
AFFX-BioB-3_at 455.7 P 0.000052
AFFX-BioC-5_at 1398.5 P 0.000044
AFFX-BioC-3_at 1567.9 P 0.000044
AFFX-BioDn-5_at 3137.3 P 0.000044
AFFX-BioDn-3_at 5680.4 P 0.000052
AFFX-CreX-5_at 13410.5 P 0.000052
AFFX-CreX-3_at 16368.6 P 0.000044
AFFX-DapX-5_at 17.5 A 0.327079
AFFX-DapX-M_at 12.7 A 0.712257
AFFX-DapX-3_at 21.3 A 0.227636
AFFX-LysX-5_at 10.2 A 0.470241
AFFX-LysX-M_at 5.2 A 0.686277
AFFX-LysX-3_at 17.4 A 0.250796
AFFX-PheX-5_at 2.4 A 0.860518
AFFX-PheX-M_at 1.5 A 0.973889
AFFX-PheX-3_at 30.6 A 0.131361
AFFX-ThrX-5_at 1.5 A 0.990663
AFFX-ThrX-M_at 4.5 A 0.712257

Total number of rows: 45101

Table truncated, full table size 1220 Kbytes.




Supplementary data files not provided

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