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Sample GSM111253 Query DataSets for GSM111253
Status Public on Apr 20, 2007
Title 06_RAHh_EB
Sample type RNA
 
Source name Embryoid bodies + Retionic acid + Hh stimulation
Organism Mus musculus
Characteristics Strain: YFP3.1 Cells with constitutively expressed Gli1FLAG. 3 days post-differentiation with 500nM retinoic acid and 1μM of Hh agonist (HH-Ag)
Biomaterial provider McMahon Laboratory - Steven Vokes
Treatment protocol ES cells were differentiated to Embryoid bodies (EBs). After plating in suspension for 2 days, EBs were treated with 500nM retinoic acid and 1μM of Hh agonist (HH-Ag)
Growth protocol EBs were grown in DFNB media (Wichterle et al, 2002 Cell 110:385-397.
Extracted molecule total RNA
Extraction protocol Trizol
Label SAPE
 
Description Neuralized Embryoid Bodies treated with 500nM Retinoic Acid and 1μM of Hh agonist (HH-Ag)
Data processing dChip
 
Submission date May 26, 2006
Last update date Jan 29, 2022
Contact name Steven A. Vokes
E-mail(s) svokes@austin.utexas.edu
Organization name University of Texas at Austin
Department Molecular Biosciences
Street address 2500 Speedway, STOP A5000
City Austin
State/province Texas
ZIP/Postal code 78757
Country USA
 
Platform ID GPL1261
Series (1)
GSE4936 Transcriptional Profiling of Hh-Treated Embryoid Bodies
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE dChip

Data table
ID_REF VALUE
1415670_at 92.1604
1415671_at 137.422
1415672_at 126.743
1415673_at 169.481
1415674_a_at 288.744
1415675_at 171.232
1415676_a_at 860.143
1415677_at 286.256
1415678_at 34.8765
1415679_at 212.637
1415680_at 84.8355
1415681_at 97.8049
1415682_at 68.4095
1415683_at 296.972
1415684_at 9.84412
1415685_at 48.6274
1415686_at 45.9242
1415687_a_at 195.906
1415688_at 132.575
1415689_s_at 14.3707

Total number of rows: 45101

Table truncated, full table size 850 Kbytes.




Supplementary file Size Download File type/resource
GSM111253.CEL.gz 5.6 Mb (ftp)(http) CEL
GSM111253.EXP.EXP.gz 519 b (ftp)(http) EXP

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