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Sample GSM111772 Query DataSets for GSM111772
Status Public on Jul 21, 2006
Title Effect of drugs, DITPA and Captopril on rat heart failure-File 49
Sample type RNA
 
Channel 1
Source name Sham (Control)
Organism Rattus norvegicus
Characteristics Sham operated rat left ventricle
Extracted molecule polyA RNA
Label Cy3
 
Channel 2
Source name Infarcted rat left ventricle
Organism Rattus norvegicus
Characteristics Infarcted rat left ventricle
Extracted molecule polyA RNA
Label Cy5
 
 
Description Rats after ligation of the left anterior descending coronary artery were used as a model of heart failure. Four groups of animals were studied using microarrays. Here, sham operated animals were compared with the heart failure animals
Data processing The data ratio was normalized using a location and intensity dependent Lowess formula
 
Submission date May 30, 2006
Last update date Jul 21, 2006
Contact name Niranjan Maitra
E-mail(s) nmaitra@email.arizona.edu
Phone 520-626-4966
Fax 520-626-8408
Organization name University of Arizona
Department Sarver Heart Center
Lab Eugene Morkin
Street address 1501 North Campbell Avenue
City Tucson
State/province AZ
ZIP/Postal code 85724
Country USA
 
Platform ID GPL3801
Series (1)
GSE4963 Heart Failure, DITPA and Captopril

Data table header descriptions
ID_REF
CH1_MEAN
CH1_SD
CH1_BKG_MEAN
CH1_BKG_SD
CH1_MEDIAN
CH1_BKG_MEDIAN
CH2_MEAN
CH2_SD
CH2_BKG_MEAN
CH2_BKG_SD
CH2_MEDIAN
CH2_BKG_MEDIAN
VALUE log2 ratio (Cy3/Cy5)

Data table
ID_REF CH1_MEAN CH1_SD CH1_BKG_MEAN CH1_BKG_SD CH1_MEDIAN CH1_BKG_MEDIAN CH2_MEAN CH2_SD CH2_BKG_MEAN CH2_BKG_SD CH2_MEDIAN CH2_BKG_MEDIAN VALUE
1 2479.259766 79.162239 2439.105225 199.92395 2470 2415 4088.361572 61.419056 4070.234375 89.332436 4086 4060 0.0412510393542895
2 2634.879883 89.798134 2554.966553 109.773132 2632 2549 4136.399902 51.116501 4088.631592 46.468384 4132 4090 -0.558995613798858
3 3824.191895 466.035553 3498.187012 697.150879 4040 3893 4269.308105 63.303257 4193.312988 80.948906 4267 4203 -2.71107503788536
4 4322.51416 105.030891 4269.243652 129.192566 4318 4269 4260.417969 49.540112 4260.273926 49.613777 4266 4260 1.29060186798165
5 4163.932129 125.281342 4099.021484 243.93187 4158 4112 4245.745605 45.595772 4235.099609 45.619263 4243 4240 1.00826464929079
6 2735.937744 161.353607 2972.865967 434.871216 2687 2748 4134.841797 44.056236 4163.066895 59.989544 4129 4160 2.13381857959452
7 2920.593262 100.60038 2737.540771 95.538437 2909 2730 4231.208984 48.125866 4180.114746 46.418213 4232 4176 -0.137421456564299
8 3009.905762 136.950577 2801.039063 94.979889 2986 2789 4271.505859 52.047234 4230.034668 69.906296 4266 4224 0.287182258117626
9 2340.3125 369.52066 2281.530518 420.34375 2348 2105 4268.13623 76.090134 4183.634766 89.40947 4284 4193 -0.455523161318403
10 2259.005615 266.70343 2042.363647 260.535553 2319 1992 4128.124512 43.991428 4120.571289 65.247246 4129 4117 1.90824463211925
11 2674.355957 242.035294 2769.244141 4222.611328 2698 2500 4260.649902 99.042107 4232.770508 314.657104 4246 4193 -0.623169531647956
12 2303.165771 102.037697 2365.301514 222.180817 2288 2346 4147.811523 52.225689 4141.119629 50.604897 4146 4143 0.361314943616272
13 2321.488525 96.837486 2127.595703 83.137108 2310 2121 4140.505859 45.692715 4113.682617 43.783901 4140 4113 0.942314099206454
14 2387.611328 89.731758 2229.312988 357.428375 2388 2202 4150.394043 46.542007 4125.517578 49.871162 4148 4121 0.7834224744086
15 2383.412354 120.261795 2182.168945 117.369064 2392 2181 4138.751465 43.213604 4124.666504 44.635197 4139 4126 1.54680995286477
16 2051.920898 83.814445 2152.856445 1486.757813 2044 1990 4137.576172 42.679359 4150.961914 316.273102 4140 4123 0.587649662782248
17 1923.154297 60.154274 1912.70813 91.459099 1923 1903 4121.725586 45.061314 4109.157715 44.485622 4124 4108 0.305855533571579
18 1939.202271 478.53244 1898.143433 94.926453 1880 1887 4102.132813 118.679855 4079.72168 48.7514 4092 4081 0.18121788119541
19 2215.772705 138.445602 1996.401855 974.994019 2206 1903 4092.59082 45.586246 4086.844727 272.742981 4093 4062 1.2441466499273
20 2193.898193 99.967392 1937.909912 89.509018 2189 1939 4081.372803 51.604122 4052.441406 41.557583 4082 4053 1.10491172074192

Total number of rows: 18144

Table truncated, full table size 2333 Kbytes.




Supplementary data files not provided

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