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Sample GSM111823 Query DataSets for GSM111823
Status Public on Jul 21, 2006
Title Effect of drugs, DITPA and Captopril on rat heart failure-File 50
Sample type RNA
 
Channel 1
Source name Infarcted rat left ventricle
Organism Rattus norvegicus
Characteristics Infarcted rat left ventricle
Extracted molecule polyA RNA
Label Cy3
 
Channel 2
Source name Sham
Organism Rattus norvegicus
Characteristics Sham operated rat left ventricle
Extracted molecule polyA RNA
Label Cy5
 
 
Description Rats after ligation of the left anterior descending coronary artery were used as a model of heart failure. Four groups of animals were studied using microarrays. Here, sham operated animals were compared with the heart failure animals.
Data processing The data ratio was normalized using a location and intensity dependent Lowess formula
 
Submission date May 30, 2006
Last update date Jul 21, 2006
Contact name Niranjan Maitra
E-mail(s) nmaitra@email.arizona.edu
Phone 520-626-4966
Fax 520-626-8408
Organization name University of Arizona
Department Sarver Heart Center
Lab Eugene Morkin
Street address 1501 North Campbell Avenue
City Tucson
State/province AZ
ZIP/Postal code 85724
Country USA
 
Platform ID GPL3801
Series (1)
GSE4963 Heart Failure, DITPA and Captopril

Data table header descriptions
ID_REF
CH1_MEAN
CH1_SD
CH1_BKG_MEAN
CH1_BKG_SD
CH1_MEDIAN
CH1_BKG_MEDIAN
CH2_MEAN
CH2_SD
CH2_BKG_MEAN
CH2_BKG_SD
CH2_MEDIAN
CH2_BKG_MEDIAN
VALUE log2 ratio (Cy5/Cy3)
INV_VALUE log2 ratio (Cy3/Cy5)

Data table
ID_REF CH1_MEAN CH1_SD CH1_BKG_MEAN CH1_BKG_SD CH1_MEDIAN CH1_BKG_MEDIAN CH2_MEAN CH2_SD CH2_BKG_MEAN CH2_BKG_SD CH2_MEDIAN CH2_BKG_MEDIAN VALUE INV_VALUE
1 9690.244141 13266.305664 3517.562012 384.958618 4403 3470 5869.51123 4481.223145 4310.292969 107.03817 4589 4295 0.276877 -0.276877161227455
2 5187.50293 1216.558838 4772.344727 1169.00061 5656 4281 4520.51416 270.403046 4393.928223 127.977898 4467 4385 -0.662645 0.662645096071113
3 6488.819824 268.72998 6291.230469 619.358521 6492 6298 4605.296387 106.951805 4530.930664 123.466614 4593 4512 0.695798 -0.695797595152881
4 7949.21582 1101.454102 7047.447754 739.322876 8300 6890 4660.875 77.495911 4634.034668 74.946716 4671 4640 -3.42505 3.42504730383171
5 6962.858887 183.37149 6466.320313 1163.391113 6960 7021 4658.994141 59.519066 4601.069336 101.196869 4662 4614 1.82747 -1.82747236984124
6 5393.893066 1218.839966 5378.708008 1327.873413 4730 4477 4519.022461 134.889069 4523.731934 221.315063 4490 4486 -2.84892 2.84892035507764
7 4043.706299 189.392303 3943.245117 329.601624 4048 3870 4502.875488 93.97187 4419.976074 155.372681 4494 4407 0.847376 -0.847375635788352
8 3526.081299 191.306503 3547.083008 1201.419189 3471 3414 4462.575684 59.067616 4435.161621 441.387451 4466 4384 0.987996 -0.987996188332366
9 3154.224121 192.828201 2995.048096 425.350616 3136 2944 4480.885254 69.249557 4370.476074 109.174149 4482 4359 0.998174 -0.99817396804896
10 2935.350586 383.824554 2706.434814 245.667801 2877 2684 4267.373535 85.940514 4254.521973 71.627968 4259 4246 -1.76079 1.76079199774798
11 3251.488525 192.65567 2769.990479 312.09845 3288 2728 4189.838867 70.002876 4159.408691 83.519173 4193 4150 -1.94268 1.94267945527583
12 3829.156982 2774.520996 3914.125 5248.684082 3294 2942 4459.331543 848.020813 4410.783691 819.815186 4286 4206 0.234922 -0.234921506658440
13 3396.534912 767.801086 3546.390869 1276.543213 3196 3270 4266.139648 247.802902 4450.189453 568.557739 4201 4250 -1.30668 1.30668286494808
14 6140.825195 11472.992188 3340.804199 356.316071 3658 3419 5858.550293 8192.896484 4256.412598 81.481308 4290 4267 1.34312 -1.34311516541774
15 3216.930664 133.948257 3107.789551 1303.68457 3199 2983 4211 68.097488 4210.866211 431.601379 4206 4168 -0.885399 0.885399247438912
16 3435.316162 442.79303 3425.27124 522.303406 3217 3119 4201.994141 81.217522 4184.733887 72.538414 4189 4183 -2.09069 2.09068719382674
17 3999.051758 566.294312 3686.659668 659.417358 4251 4056 4249.442383 78.189667 4210.547852 119.494301 4262 4205 1.83171 -1.83171305097984
18 3520.866211 439.707764 3492.298096 614.05835 3359 3154 4230.593262 87.867767 4212.860352 153.32666 4215 4182 -1.23118 1.23118166182747
19 3158.373535 390.781891 2781.783691 462.646606 3137 2679 4169.333496 90.855423 4110.851074 153.08725 4165 4093 -0.833536 0.83353560312599
20 2782.74585 1790.439209 2415.349365 291.228821 2649 2372 4121.926758 120.132645 4073.933105 94.602745 4109 4066 -1.14863 1.14862828887626

Total number of rows: 18144

Table truncated, full table size 2510 Kbytes.




Supplementary data files not provided

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