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Sample GSM111825 Query DataSets for GSM111825
Status Public on Jul 21, 2006
Title Effect of drugs, DITPA and Captopril on rat heart failure-File 52
Sample type RNA
 
Channel 1
Source name Infarcted rat left ventricle
Organism Rattus norvegicus
Characteristics Infarcted rat left ventricle
Extracted molecule polyA RNA
Label Cy3
 
Channel 2
Source name Sham
Organism Rattus norvegicus
Characteristics Sham operated rat left ventricle
Extracted molecule polyA RNA
Label Cy5
 
 
Description Rats after ligation of the left anterior descending coronary artery were used as a model of heart failure. Four groups of animals were studied using microarrays. Here, sham operated animals were compared with the heart failure animals.
Data processing The data ratio was normalized using a location and intensity dependent Lowess formula
 
Submission date May 30, 2006
Last update date Jul 21, 2006
Contact name Niranjan Maitra
E-mail(s) nmaitra@email.arizona.edu
Phone 520-626-4966
Fax 520-626-8408
Organization name University of Arizona
Department Sarver Heart Center
Lab Eugene Morkin
Street address 1501 North Campbell Avenue
City Tucson
State/province AZ
ZIP/Postal code 85724
Country USA
 
Platform ID GPL3801
Series (1)
GSE4963 Heart Failure, DITPA and Captopril

Data table header descriptions
ID_REF
CH1_MEAN
CH1_SD
CH1_BKG_MEAN
CH1_BKG_SD
CH1_MEDIAN
CH1_BKG_MEDIAN
CH2_MEAN
CH2_SD
CH2_BKG_MEAN
CH2_BKG_SD
CH2_MEDIAN
CH2_BKG_MEDIAN
VALUE log2 ratio (Cy5/Cy3)
INV_VALUE log2 ratio (Cy3/Cy5)

Data table
ID_REF CH1_MEAN CH1_SD CH1_BKG_MEAN CH1_BKG_SD CH1_MEDIAN CH1_BKG_MEDIAN CH2_MEAN CH2_SD CH2_BKG_MEAN CH2_BKG_SD CH2_MEDIAN CH2_BKG_MEDIAN VALUE INV_VALUE
1 2797.440674 76.70047 2653.547852 56.444355 2807 2648 3793.333252 42.890797 3773.954834 41.994503 3791 3776 -0.327062 0.32706179208973
2 2823.822754 74.552055 2690.608154 53.841393 2830 2689 3818.588623 46.77264 3788.206055 41.131008 3821 3786 0.501947 -0.501947021979203
3 2893.352539 91.867104 2735.264893 56.875141 2906 2734 3829.895996 47.121204 3802.484131 38.018753 3830 3800 0.221134 -0.221133958204732
4 2752.931885 54.564732 2737.991211 48.091934 2752 2738 3799.005615 38.440979 3802.724854 38.521339 3799 3800 -0.433752 0.433751654958896
5 3140.431152 3858.650146 2754.234863 91.374161 2761 2746 3842.373535 350.728455 3815 36.749237 3814 3813 -0.660376 0.660376339533086
6 2788.290771 49.531815 2766.644287 46.037464 2790 2763 3826.593018 40.077961 3825.158691 40.647869 3829 3827 -0.484601 0.484600601269256
7 2987.121338 88.94075 2790.111816 42.905602 3004 2791 3862.693604 43.942532 3844.984131 40.395966 3861 3845 -0.53613 0.536129546676498
8 3008.017334 97.184891 2819.067383 47.910801 3027 2816 3882.994141 41.95369 3848.730713 45.355652 3883 3847 0.332515 -0.332514817237827
9 3031.086182 86.480118 2848.336426 113.74176 3035 2838 3896.045898 44.804127 3863.360596 56.24807 3900 3861 0.28427 -0.284270440095112
10 3019.858643 88.039543 2919.415527 1018.769531 3041 2842 3912.536621 47.869144 3880.80957 46.867973 3916 3877 0.386206 -0.386206218692596
11 2997.621582 95.614212 2824.311035 52.843792 3018 2823 3908.378418 42.094975 3880.124512 44.898422 3910 3880 0.0758859 -0.0758859443576245
12 2352.605713 335.599182 2341.913818 392.438263 2291 2219 3898.531494 56.696396 3869.459229 47.526604 3898 3867 0.477986 -0.477986164840566
13 2618.843018 236.671524 2409.296875 340.352783 2609 2521 3943.796631 47.160908 3873.366699 41.660759 3943 3872 2.29554 -2.29553901969645
14 2782.234375 156.894974 2546.668213 146.21994 2811 2498 3853.03418 42.912624 3832.637451 45.435364 3854 3834 -0.819506 0.819506408564974
15 2552.784912 115.818024 2347.443359 58.306702 2574 2345 3828.145264 42.698544 3802.156494 43.318588 3830 3804 -0.281182 0.281181693860376
16 2378.196533 51.267273 2328.037354 59.44902 2380 2326 3807.144531 41.376694 3799.202148 41.267887 3809 3797 -0.0847965 0.0847964869546995
17 2456.931152 62.054844 2391.308594 74.588013 2449 2384 3823.477051 47.664371 3812.718018 44.509808 3826 3816 -0.400097 0.400096779326107
18 2616.779053 136.16861 2527.836426 109.469223 2593 2506 3837.075684 45.743752 3821.418213 40.886116 3837 3819 -0.0466153 0.0466153289596685
19 2831.90918 105.779785 2590 118.586617 2843 2553 3836.02832 44.457294 3811.119873 39.737507 3836 3809 -0.418508 0.418508220862286
20 2866.909668 142.044571 2596.703369 115.493843 2881 2555 3840.949219 42.735088 3814.244141 35.814476 3838 3817 -0.666886 0.666886144642026

Total number of rows: 18144

Table truncated, full table size 2493 Kbytes.




Supplementary data files not provided

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