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Sample GSM111827 Query DataSets for GSM111827
Status Public on Jul 21, 2006
Title Effect of drugs, DITPA and Captopril on rat heart failure-File 54
Sample type RNA
 
Channel 1
Source name Infarcted rat left ventricle
Organism Rattus norvegicus
Characteristics Infarcted rat left ventricle
Extracted molecule polyA RNA
Label Cy3
 
Channel 2
Source name Sham
Organism Rattus norvegicus
Characteristics Sham operated rat left ventricle
Extracted molecule polyA RNA
Label Cy5
 
 
Description Rats after ligation of the left anterior descending coronary artery were used as a model of heart failure. Four groups of animals were studied using microarrays. Here, sham operated animals were compared with the heart failure animals.
Data processing The data ratio was normalized using a location and intensity dependent Lowess formula
 
Submission date May 30, 2006
Last update date Jul 21, 2006
Contact name Niranjan Maitra
E-mail(s) nmaitra@email.arizona.edu
Phone 520-626-4966
Fax 520-626-8408
Organization name University of Arizona
Department Sarver Heart Center
Lab Eugene Morkin
Street address 1501 North Campbell Avenue
City Tucson
State/province AZ
ZIP/Postal code 85724
Country USA
 
Platform ID GPL3801
Series (1)
GSE4963 Heart Failure, DITPA and Captopril

Data table header descriptions
ID_REF
CH1_MEAN
CH1_SD
CH1_BKG_MEAN
CH1_BKG_SD
CH1_MEDIAN
CH1_BKG_MEDIAN
CH2_MEAN
CH2_SD
CH2_BKG_MEAN
CH2_BKG_SD
CH2_MEDIAN
CH2_BKG_MEDIAN
VALUE log2 ratio (Cy5/Cy3)
INV_VALUE log2 ratio (Cy3/Cy5)

Data table
ID_REF CH1_MEAN CH1_SD CH1_BKG_MEAN CH1_BKG_SD CH1_MEDIAN CH1_BKG_MEDIAN CH2_MEAN CH2_SD CH2_BKG_MEAN CH2_BKG_SD CH2_MEDIAN CH2_BKG_MEDIAN VALUE INV_VALUE
1 1948.875732 40.092442 1838.928223 48.339149 1951 1833 3990.49707 45.535843 3961.138672 41.712997 3986 3962 0.412651 -0.412651263995691
2 2050.228516 123.862854 2147.462646 411.433899 2033 1923 3990.902832 49.81802 4004.015869 85.968483 3992 3983 -0.663622 0.663621575700217
3 3505.024902 114.671532 2386.962891 315.415466 3513 2431 4236.700195 59.74614 4021.825928 69.145584 4233 4019 1.69325 -1.69325202445806
4 2745.537109 315.797485 2517.971191 297.551971 2619 2430 4084.954346 68.732681 4070.461426 74.135536 4086 4064 -0.68205 0.682049949996147
5 2599.788574 354.852264 2438.181885 335.41275 2422 2358 4058.7771 70.517082 4073.315674 73.564247 4050 4064 -1.75298 1.75298206323251
6 2491.959229 327.688202 2474.846924 391.101837 2388 2364 4034.279053 54.400757 4059.138672 72.871681 4031 4055 -2.2086 2.20860261470013
7 2629.635742 316.021606 2455.202148 439.034546 2552 2260 4061.306396 54.641468 4049.388184 64.554276 4059 4044 -0.980625 0.980625260530033
8 2573.517334 317.744995 2485.5625 387.482422 2532 2465 4035.540771 46.806351 4036.673096 66.475441 4038 4028 -0.579519 0.579519049287335
9 2606.354736 415.261719 2590.222656 270.050812 2621 2608 4051.244141 75.379196 4062.515381 62.035835 4041 4066 -1.09661 1.09660957151387
10 2973.683838 316.780273 2534.765137 210.220795 3010 2557 4148.005859 67.752754 4082.556641 58.866482 4154 4089 0.577543 -0.577543160676559
11 2955.879883 79.272644 2608.286865 84.839012 2956 2595 4165.896973 43.652496 4099.217285 47.163803 4163 4102 0.87524 -0.875240082207386
12 3008.258545 119.276466 2626.951904 127.204651 3001 2630 4161.161133 44.408226 4088.144287 51.506187 4155 4087 1.09636 -1.09636083115683
13 2764.296631 653.765564 2447.398926 408.297913 2442 2368 4086.168701 72.289467 4058.278809 64.953865 4068 4052 -0.310742 0.310741987303958
14 3278.556885 577.850525 2584.539063 352.827728 3518 2776 4174.23291 74.412964 4098.556641 61.900639 4185 4097 0.875059 -0.875059098006181
15 3444.423828 374.312836 2691.857178 233.693115 3498 2762 4173.265625 62.712086 4088.709961 56.701111 4175 4086 0.744193 -0.744193081440345
16 2876.401123 370.859558 2747.571533 192.394943 2969 2799 4113.508301 77.135071 4076.887451 49.31316 4115 4078 1.06549 -1.06549215118859
17 3080.062256 98.835091 2936.162598 146.310974 3054 2935 4130.446289 50.194828 4103.789551 53.402451 4135 4105 0.122581 -0.122580688457013
18 3210.610352 108.209755 3136.435303 144.177734 3189 3123 4156.063965 51.499184 4127.765625 51.489487 4159 4126 0.714815 -0.714814802484452
19 4341.775391 145.450363 3323.946777 295.754547 4336 3171 4180.956543 47.987354 4118.333496 46.934574 4178 4118 -0.459553 0.459553348240293
20 4130.393066 330.060486 3240.358887 292.643219 4175 3108 4163.157227 49.449486 4101.63623 48.475628 4161 4100 -0.290075 0.290074825256476

Total number of rows: 18144

Table truncated, full table size 2496 Kbytes.




Supplementary data files not provided

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