NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM111828 Query DataSets for GSM111828
Status Public on Jul 21, 2006
Title Effect of drugs, DITPA and Captopril on rat heart failure-File 55
Sample type RNA
 
Channel 1
Source name Sham (Control)
Organism Rattus norvegicus
Characteristics Sham operated rat left ventricle
Extracted molecule polyA RNA
Label Cy3
 
Channel 2
Source name Infarcted rat left ventricle
Organism Rattus norvegicus
Characteristics Infarcted rat left ventricle
Extracted molecule polyA RNA
Label Cy5
 
 
Description Rats after ligation of the left anterior descending coronary artery were used as a model of heart failure. Four groups of animals were studied using microarrays. Here, sham operated animals were compared with the heart failure animals.
Data processing The data ratio was normalized using a location and intensity dependent Lowess formula
 
Submission date May 30, 2006
Last update date Jul 21, 2006
Contact name Niranjan Maitra
E-mail(s) nmaitra@email.arizona.edu
Phone 520-626-4966
Fax 520-626-8408
Organization name University of Arizona
Department Sarver Heart Center
Lab Eugene Morkin
Street address 1501 North Campbell Avenue
City Tucson
State/province AZ
ZIP/Postal code 85724
Country USA
 
Platform ID GPL3801
Series (1)
GSE4963 Heart Failure, DITPA and Captopril

Data table header descriptions
ID_REF
CH1_MEAN
CH1_SD
CH1_BKG_MEAN
CH1_BKG_SD
CH1_MEDIAN
CH1_BKG_MEDIAN
CH2_MEAN
CH2_SD
CH2_BKG_MEAN
CH2_BKG_SD
CH2_MEDIAN
CH2_BKG_MEDIAN
VALUE log2 ratio (Cy3/Cy5)

Data table
ID_REF CH1_MEAN CH1_SD CH1_BKG_MEAN CH1_BKG_SD CH1_MEDIAN CH1_BKG_MEDIAN CH2_MEAN CH2_SD CH2_BKG_MEAN CH2_BKG_SD CH2_MEDIAN CH2_BKG_MEDIAN VALUE
1 2775.152588 375.475311 2743.421143 362.348572 2863 2738 4054.412354 53.150032 4025.196289 85.687408 4058 4015 -1.82196879469912
2 2438.617188 111.628944 2461.645996 240.430008 2423 2365 3963.411377 40.456188 3962.564697 45.747498 3967 3961 0.590739508394971
3 2261.901123 122.261658 2231.169678 81.076607 2242 2221 3964.337158 47.595665 3964.247803 50.152901 3961 3963 0.435749750459888
4 2223.175049 34.367954 2221.534668 36.949936 2223 2221 3971.54248 45.467525 3964.804443 44.682976 3970 3959 -0.600936665676041
5 2268.062256 52.192398 2296.389648 89.932068 2261 2276 3954.197754 41.184608 3964.670898 43.409218 3952 3960 0.419771681702851
6 2666.440674 68.402855 2610.004883 135.875793 2671 2657 3998.994385 39.680195 3990.291748 44.627361 4000 3987 -0.495966977478643
7 2711.7854 171.106659 2495.698486 223.322769 2713 2521 3983.158203 42.078228 3967.559814 47.297318 3986 3965 0.556003847996146
8 2159.823486 58.19965 2101.017334 92.017273 2166 2066 3933.017578 40.936172 3926.108643 38.541779 3932 3928 0.60669735252077
9 2069.272705 37.9132 2023.726074 33.411926 2067 2026 3919.051025 41.389484 3910.456543 40.461155 3920 3909 -0.0569248837917398
10 2073.062256 33.26907 2033.333374 35.745193 2074 2031 3927.423828 39.636482 3923.069336 45.147343 3925 3924 0.328049136060677
11 2065.175049 49.168747 2041.755981 105.138985 2058 2031 3932.994385 40.189678 3934.497559 46.950169 3934 3932 0.401354232809458
12 2024.062866 31.443655 2003.444946 34.673729 2022 2002 3920.234375 37.114429 3919.425781 46.568676 3920 3917 0.151857273030082
13 2077.201172 47.340977 1994.952148 36.254478 2078 1994 3910.22998 41.109241 3898.695557 42.659134 3914 3897 0.109090513370991
14 2113.765625 85.538452 2040.865234 63.037132 2110 2034 3902.291504 41.941273 3894.374023 42.636257 3905 3891 0.175705797971614
15 2208 54.474659 2118.774902 67.764687 2208 2116 3895.367188 42.022152 3887.445801 41.126484 3896 3886 0.381285911975191
16 2342.508545 948.389526 2211.287109 59.710648 2238 2209 3896.768311 105.338837 3882.488037 47.444408 3892 3883 0.482302988269497
17 2273.560059 38.087101 2309.875488 131.615829 2273 2279 3896.411377 39.084373 3925.602783 90.775986 3899 3908 0.783909781758133
18 2710.317871 291.072205 2650.595703 299.460022 2766 2551 4121.682129 149.163742 4077.613037 167.711456 4160 4008 -2.26229877927624
19 2923.801025 304.182709 2680.952393 265.316345 2828 2578 4099.602051 156.755402 4080.480957 165.816193 4043 3998 -0.991999276529034
20 2453.079102 132.678955 2347.976074 158.613815 2499 2310 3923.977295 39.21125 3931.317383 77.324745 3930 3922 1.11120675515699

Total number of rows: 18144

Table truncated, full table size 2322 Kbytes.




Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap