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Sample GSM111829 Query DataSets for GSM111829
Status Public on Jul 21, 2006
Title Effect of drugs, DITPA and Captopril on rat heart failure-File 56
Sample type RNA
 
Channel 1
Source name Infarcted rat left ventricle
Organism Rattus norvegicus
Characteristics Infarcted rat left ventricle
Extracted molecule polyA RNA
Label Cy3
 
Channel 2
Source name Sham
Organism Rattus norvegicus
Characteristics Sham operated rat left ventricle
Extracted molecule polyA RNA
Label Cy5
 
 
Description Rats after ligation of the left anterior descending coronary artery were used as a model of heart failure. Four groups of animals were studied using microarrays. Here, sham operated animals were compared with the heart failure animals.
Data processing The data ratio was normalized using a location and intensity dependent Lowess formula
 
Submission date May 30, 2006
Last update date Jul 21, 2006
Contact name Niranjan Maitra
E-mail(s) nmaitra@email.arizona.edu
Phone 520-626-4966
Fax 520-626-8408
Organization name University of Arizona
Department Sarver Heart Center
Lab Eugene Morkin
Street address 1501 North Campbell Avenue
City Tucson
State/province AZ
ZIP/Postal code 85724
Country USA
 
Platform ID GPL3801
Series (1)
GSE4963 Heart Failure, DITPA and Captopril

Data table header descriptions
ID_REF
CH1_MEAN
CH1_SD
CH1_BKG_MEAN
CH1_BKG_SD
CH1_MEDIAN
CH1_BKG_MEDIAN
CH2_MEAN
CH2_SD
CH2_BKG_MEAN
CH2_BKG_SD
CH2_MEDIAN
CH2_BKG_MEDIAN
VALUE log2 ratio (Cy5/Cy3)
INV_VALUE log2 ratio (Cy3/Cy5)

Data table
ID_REF CH1_MEAN CH1_SD CH1_BKG_MEAN CH1_BKG_SD CH1_MEDIAN CH1_BKG_MEDIAN CH2_MEAN CH2_SD CH2_BKG_MEAN CH2_BKG_SD CH2_MEDIAN CH2_BKG_MEDIAN VALUE INV_VALUE
1 3527.870117 167.9328 3010.263184 154.133469 3532 2999 3887.875732 49.638657 3857.114746 43.321659 3888 3859 -0.971145 0.97114466815101
2 3068.365723 120.864281 2716.650635 94.985809 3083 2717 3841.554199 40.277145 3817.569336 43.716038 3841 3819 -0.724759 0.724758575274471
3 3020.352539 124.426399 2629.539063 56.380997 3044 2628 3845.462402 46.178307 3825.004395 43.627502 3844 3824 -0.907946 0.907946063605301
4 2709.404541 73.994797 2684.817383 64.117699 2703 2680 3816.786133 59.411991 3821.168213 51.858734 3817 3819 -0.326182 0.326181573400463
5 2801.926514 67.090508 2818.521484 381.821289 2796 2780 3821.231689 50.249916 3835.248779 105.973473 3821 3831 -0.737584 0.737583946511797
6 3160.265625 1839.560425 2926.019043 84.199448 2978 2926 3907.525391 235.755264 3864.220215 49.314915 3875 3865 0.517729 -0.517729125684715
7 3550.143799 216.283203 3056.425781 210.313049 3594 3043 3920.620605 53.948971 3886.598145 106.233826 3918 3875 -0.375952 0.375952177503494
8 3748.352539 77.847786 3172.415283 276.839111 3746 3109 3977.639404 55.829002 3903.979492 58.55476 3971 3907 -0.156442 0.156441959696557
9 3727.65918 118.721039 3108.720947 93.765663 3749 3100 3959.266602 44.073078 3893.205322 46.938717 3963 3894 -0.238064 0.238063922856989
10 3585.045654 175.50824 3166.770264 113.769402 3623 3137 3932.394287 48.263504 3893.607666 56.395996 3933 3894 -0.480126 0.480126481494183
11 3661.842773 355.357452 3557.031982 4554.324707 3778 3256 4026.539307 93.558525 4406.909668 4859.502441 4018 3931 0.931006 -0.931006467124353
12 4333.046387 2342.008789 5883.90625 12818.832031 3995 3075 4105.015625 717.704712 6005.657715 11137.124023 3973 3873 0.310316 -0.310316084442912
13 3829.783691 183.082657 3047.267822 148.473511 3847 3085 3940.544678 46.103615 3858.655762 39.686359 3936 3861 -0.291301 0.291301098683778
14 3980.417236 456.311554 3111.441406 76.888817 3951 3109 3958.640381 70.518265 3843.319092 41.976368 3952 3842 -0.026176 0.0261759619305586
15 4090.399902 163.299362 3077.668457 60.192379 4119 3073 3970.592529 56.882084 3837.268311 44.900913 3969 3837 -0.0928305 0.0928304556373813
16 3608.251465 170.233353 3122.026611 113.899925 3640 3102 3891.628662 43.093781 3856.425537 47.914021 3892 3855 -0.75914 0.759139819092159
17 3717.548584 220.624771 3281.492432 268.820251 3786 3228 3894.2229 54.100822 3880.706543 55.240005 3895 3875 -1.37901 1.37900796486175
18 3641.404541 251.032974 3325.962891 170.260208 3708 3295 3907.306396 46.031761 3887.12085 48.765259 3909 3888 -0.954305 0.95430503033351
19 4530.659668 102.665382 3364.519287 91.821243 4532 3362 4077.319092 56.382034 3898.453125 52.02964 4079 3902 0.0214924 -0.0214923606921467
20 4460.881348 122.015846 3450.841309 165.097809 4454 3417 4098.79248 51.638103 3930.608398 55.274403 4094 3929 0.14947 -0.149470059698395

Total number of rows: 18144

Table truncated, full table size 2495 Kbytes.




Supplementary data files not provided

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