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Sample GSM111861 Query DataSets for GSM111861
Status Public on Jul 21, 2006
Title Effect of drugs, DITPA and Captopril on rat heart failure-File 57
Sample type RNA
 
Channel 1
Source name Infarcted rat left ventricle
Organism Rattus norvegicus
Characteristics Infarcted rat left ventricle
Extracted molecule polyA RNA
Label Cy3
 
Channel 2
Source name Infarcted rat left ventricle treated with DITPA
Organism Rattus norvegicus
Characteristics Infarcted rat left ventricle treated with DITPA
Extracted molecule polyA RNA
Label Cy5
 
 
Description Rats after ligation of the left anterior descending coronary artery were used as a model of heart failure. Four groups of animals were studied using microarrays. Here, heart failure animals were compared with heart failure animals treated with DITPA
Data processing The data ratio was normalized using a location and intensity dependent Lowess formula
 
Submission date May 31, 2006
Last update date Jul 21, 2006
Contact name Niranjan Maitra
E-mail(s) nmaitra@email.arizona.edu
Phone 520-626-4966
Fax 520-626-8408
Organization name University of Arizona
Department Sarver Heart Center
Lab Eugene Morkin
Street address 1501 North Campbell Avenue
City Tucson
State/province AZ
ZIP/Postal code 85724
Country USA
 
Platform ID GPL3801
Series (1)
GSE4963 Heart Failure, DITPA and Captopril

Data table header descriptions
ID_REF
CH1_MEAN
CH1_SD
CH1_BKG_MEAN
CH1_BKG_SD
CH1_MEDIAN
CH1_BKG_MEDIAN
CH2_MEAN
CH2_SD
CH2_BKG_MEAN
CH2_BKG_SD
CH2_MEDIAN
CH2_BKG_MEDIAN
VALUE log2 ratio (Cy5/Cy3)
INV_VALUE log2 ratio (Cy3/Cy5)

Data table
ID_REF CH1_MEAN CH1_SD CH1_BKG_MEAN CH1_BKG_SD CH1_MEDIAN CH1_BKG_MEDIAN CH2_MEAN CH2_SD CH2_BKG_MEAN CH2_BKG_SD CH2_MEDIAN CH2_BKG_MEDIAN VALUE INV_VALUE
1 2189.689209 69.203247 2096.58374 59.989777 2182 2094 3962.519775 41.630424 3949.837402 40.070522 3960 3952 -0.389064 0.389064010469463
2 2242.11499 87.092262 2127.497559 57.323902 2239 2127 3958.258545 45.111763 3938.880371 44.255272 3959 3934 0.0907201 -0.0907201161960822
3 2251.086182 74.33271 2140.3479 88.30159 2249 2134 3961.666748 41.517925 3941.286865 43.591446 3956 3938 0.0510444 -0.0510444249131892
4 2151.362061 54.505241 2155.074219 150.277176 2146 2135 3947.793213 44.685322 3946.729248 44.243206 3945 3943 0.0371605 -0.0371604760993645
5 2180.092529 85.659576 2372.688965 1690.684937 2175 2174 3978.50293 50.530396 4061.789551 859.198792 3975 3982 -0.319082 0.31908213112962
6 2314.199951 54.248257 2328.946777 350.408447 2310 2293 4006.062744 46.892159 4004.755371 65.286812 4007 3995 0.324299 -0.32429918206368
7 2617.086182 85.08316 2394.138184 60.757008 2617 2394 4061.672363 42.157581 4020.409668 48.422028 4061 4018 0.0230351 -0.0230350962467494
8 2682.953857 111.423409 2492.8479 67.795982 2678 2490 4083.537598 43.984596 4049.317383 45.070621 4086 4049 -0.105132 0.105131871806745
9 2841.005859 94.8694 2621.386963 86.292809 2835 2621 4092.155273 45.777473 4050.308594 46.178097 4089 4049 0.0210553 -0.0210553389563319
10 2927.925781 146.20813 2636.586914 118.736382 2971 2646 4088.76001 49.591431 4043.665283 51.274036 4087 4044 -0.236482 0.236482262509512
11 2217.866211 300.736206 2423 467.001465 2133 2471 4021.767334 71.921852 4070.432617 363.71637 4015 4035 0.434046 -0.434046381947053
12 2465.838135 245.391785 2395.54248 304.423218 2431 2489 4013.017334 58.690403 4015.861816 71.464371 4009 4020 -0.325341 0.325341206171819
13 3071.505859 272.419464 2613.898926 274.899811 3075 2650 4199.603516 88.994972 4069.091309 57.910774 4212 4064 0.988754 -0.988754408229713
14 2943.898193 319.569611 2539.019287 220.571564 3039 2485 4065.649658 68.450645 4022.572021 58.185814 4068 4020 -0.826601 0.826600709439532
15 2575.717529 226.227478 2262.233887 132.407867 2626 2276 4025.186523 51.840157 3981.718506 44.751427 4031 3979 -0.268693 0.268692784129809
16 2214.74292 91.826202 2142.937744 123.555367 2205 2130 3982.805664 44.150963 3972.784668 50.048603 3986 3973 -0.298322 0.298322092884400
17 2112.046143 63.039101 2058.101074 76.551735 2109 2049 3962.115723 42.63512 3959.576904 49.597843 3962 3961 -0.500994 0.500994012989352
18 2091.215088 57.037327 2060.10083 72.135956 2085 2052 3973.348877 43.489132 3972.592041 50.181656 3973 3970 -0.194638 0.194637846463012
19 2318.634277 150.140457 2102.356689 93.012489 2362 2086 4011.822754 53.566349 3990.964844 52.526428 4014 3989 -0.759423 0.759423222265976
20 2331.163818 167.187317 2132.236084 104.908958 2391 2106 4044.700684 54.765972 4008.628174 54.10561 4052 4007 -0.208313 0.208312747191888

Total number of rows: 18144

Table truncated, full table size 2499 Kbytes.




Supplementary data files not provided

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