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Sample GSM111864 Query DataSets for GSM111864
Status Public on Jul 21, 2006
Title Effect of drugs, DITPA and Captopril on rat heart failure-File 59
Sample type RNA
 
Channel 1
Source name Infarcted rat left ventricle
Organism Rattus norvegicus
Characteristics Infarcted rat left ventricle
Extracted molecule polyA RNA
Label Cy3
 
Channel 2
Source name Infarcted rat left ventricle treated with DITPA
Organism Rattus norvegicus
Characteristics Infarcted rat left ventricle treated with DITPA
Extracted molecule polyA RNA
Label Cy5
 
 
Description Rats after ligation of the left anterior descending coronary artery were used as a model of heart failure. Four groups of animals were studied using microarrays. Here, heart failure animals were compared with heart failure animals treated with DITPA
Data processing The data ratio was normalized using a location and intensity dependent Lowess formula
 
Submission date May 31, 2006
Last update date Jul 21, 2006
Contact name Niranjan Maitra
E-mail(s) nmaitra@email.arizona.edu
Phone 520-626-4966
Fax 520-626-8408
Organization name University of Arizona
Department Sarver Heart Center
Lab Eugene Morkin
Street address 1501 North Campbell Avenue
City Tucson
State/province AZ
ZIP/Postal code 85724
Country USA
 
Platform ID GPL3801
Series (1)
GSE4963 Heart Failure, DITPA and Captopril

Data table header descriptions
ID_REF
CH1_MEAN
CH1_SD
CH1_BKG_MEAN
CH1_BKG_SD
CH1_MEDIAN
CH1_BKG_MEDIAN
CH2_MEAN
CH2_SD
CH2_BKG_MEAN
CH2_BKG_SD
CH2_MEDIAN
CH2_BKG_MEDIAN
VALUE log2 ratio (Cy5/Cy3)
INV_VALUE log2 ratio (Cy3/Cy5)

Data table
ID_REF CH1_MEAN CH1_SD CH1_BKG_MEAN CH1_BKG_SD CH1_MEDIAN CH1_BKG_MEDIAN CH2_MEAN CH2_SD CH2_BKG_MEAN CH2_BKG_SD CH2_MEDIAN CH2_BKG_MEDIAN VALUE INV_VALUE
1 2400.039551 62.275356 2242.684326 43.293564 2409 2248 3846.926514 43.19236 3833.392334 39.940937 3847 3831 -0.0161495 0.0161495124010234
2 2668.900635 1045.191772 2155.607422 50.079369 2331 2151 3866.602783 88.954636 3823.190186 40.213409 3844 3825 -0.0872354 0.0872354276042664
3 2233.732666 52.378494 2096.026611 39.765675 2234 2093 3833.837158 39.548584 3825.324463 43.156918 3834 3825 -0.3301 0.330100287844806
4 2062.902832 52.488388 2058.197021 33.939342 2058 2056 3837.577148 48.380245 3834.773926 46.14336 3837 3833 0.239356 -0.239355589326431
5 2028.836182 34.566166 2017.74646 38.227783 2026 2017 3825.305176 39.317295 3819.631592 41.002026 3827 3824 0.0101815 -0.010181545823853
6 1991.254272 34.493866 1975.808594 34.171272 1996 1978 3809.163818 41.605991 3812.095703 44.52388 3808 3811 -0.19217 0.192169707569819
7 12139.142578 17879.720703 1977.209839 71.697342 3108 1955 7482.200195 8760.661133 3810.193359 41.736465 4027 3812 1.96411 -1.96411191120281
8 2066.447754 54.282692 1952.47876 34.869728 2074 1949 3810.726807 40.234985 3802.962646 42.515717 3809 3805 -0.377635 0.377635200966543
9 2047.045166 51.078026 1928.802856 40.467377 2053 1930 3806.124268 42.012527 3788.278809 41.328648 3806 3789 0.216217 -0.216216921884329
10 1998.363647 35.433052 1915.822998 35.545242 1995 1915 3807.164795 40.072811 3801.703369 39.708656 3807 3802 -0.218108 0.218108404184973
11 2021.022583 34.934353 1939.224854 35.384724 2026 1937 3822.084717 46.327003 3814.995117 44.413975 3822 3817 -0.227995 0.227994535180398
12 2004.706909 45.957386 1922.574463 34.385197 2007 1924 3825.643799 41.140945 3815.223389 38.335613 3823 3815 0.101154 -0.101154417468963
13 2128.470947 88.547958 1905.856323 35.140594 2147 1907 3824.354736 40.671654 3804 46.105553 3827 3799 0.163502 -0.163501679353466
14 2822.047607 168.115265 2138.063232 130.037003 2830 2118 3869.19043 38.373978 3805.65332 48.170761 3870 3805 0.20188 -0.201880255647197
15 2214.085693 102.788582 1998.813354 47.949478 2236 1989 3802.451416 39.544346 3788.708252 39.492771 3798 3788 -0.364917 0.364916528730175
16 2087.085693 56.986782 2031.3302 63.681835 2094 2031 3816.439941 41.909122 3806.631592 48.42543 3817 3806 0.235546 -0.235545712131374
17 2164.782959 38.779938 2151.058594 76.696579 2162 2141 3836.428467 40.162651 3838.005371 48.388638 3844 3840 -0.375874 0.375874413183398
18 2204.694092 46.498207 2255.430908 139.51738 2206 2230 3849.970703 42.766396 3857.063721 54.626057 3848 3857 -0.322186 0.322185645117396
19 2412.712646 144.486862 2216.836426 241.311432 2437 2091 3816.206787 45.530689 3802.389404 47.726143 3817 3799 -0.583263 0.583263095673301
20 2529.339111 624.743896 2192.869385 224.947983 2494 2073 3807.827637 129.579102 3778.210938 40.144642 3789 3776 -0.381233 0.381232972041545

Total number of rows: 18144

Table truncated, full table size 2496 Kbytes.




Supplementary data files not provided

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