NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM112038 Query DataSets for GSM112038
Status Public on Jul 21, 2006
Title Effect of drugs, DITPA and Captopril on rat heart failure-File 73
Sample type RNA
 
Channel 1
Source name Infarcted rat left ventricle
Organism Rattus norvegicus
Characteristics Infarcted rat left ventricle
Extracted molecule polyA RNA
Label Cy3
 
Channel 2
Source name Infarcted rat left ventricle treated with DITPA and Captopril
Organism Rattus norvegicus
Characteristics Infarcted rat left ventricle treated with DITPA and Captopril
Extracted molecule polyA RNA
Label Cy5
 
 
Description Rats after ligation of the left anterior descending coronary artery were used as a model of heart failure. Four groups of animals were studied using microarrays. Here, heart failure animals were compared with heart failure animals treated with DITPA and Captopril
Data processing The data ratio was normalized using a location and intensity dependent Lowess formula
 
Submission date Jun 01, 2006
Last update date Jul 21, 2006
Contact name Niranjan Maitra
E-mail(s) nmaitra@email.arizona.edu
Phone 520-626-4966
Fax 520-626-8408
Organization name University of Arizona
Department Sarver Heart Center
Lab Eugene Morkin
Street address 1501 North Campbell Avenue
City Tucson
State/province AZ
ZIP/Postal code 85724
Country USA
 
Platform ID GPL3801
Series (1)
GSE4963 Heart Failure, DITPA and Captopril

Data table header descriptions
ID_REF
CH1_MEAN
CH1_SD
CH1_BKG_MEAN
CH1_BKG_SD
CH1_MEDIAN
CH1_BKG_MEDIAN
CH2_MEAN
CH2_SD
CH2_BKG_MEAN
CH2_BKG_SD
CH2_MEDIAN
CH2_BKG_MEDIAN
VALUE log2 ratio (Cy5/Cy3)
INV_VALUE log2 ratio (Cy3/Cy5)

Data table
ID_REF CH1_MEAN CH1_SD CH1_BKG_MEAN CH1_BKG_SD CH1_MEDIAN CH1_BKG_MEDIAN CH2_MEAN CH2_SD CH2_BKG_MEAN CH2_BKG_SD CH2_MEDIAN CH2_BKG_MEDIAN VALUE INV_VALUE
1 1348.890869 3630.610352 1194.925659 3844.202637 1044 870 3355.751465 2016.202637 3227.736572 1209.490356 3183 3124 -1.03543 1.03542557813979
2 1018.475159 23.320929 1124.930176 3567.945801 1019 841 3174.290771 39.672688 3204.575684 1122.701782 3172 3114 -0.912132 0.912132405172323
3 969.014343 69.021011 844.108948 31.846519 996 840 3151.234375 43.818295 3110.871826 37.141357 3155 3113 -0.904706 0.904706141273515
4 841.004822 21.337749 848 40.061165 841 838 3110.601074 35.535912 3112.97583 44.979053 3109 3113 -0.260443 0.260442878141539
5 920.90387 43.357754 902.596375 57.874153 926 920 3143.9375 46.751034 3136.536133 51.392693 3146 3141 0.112543 -0.112543079168614
6 934.57489 34.244598 911.889648 63.723164 940 930 3142.04834 44.53936 3149.882813 68.044151 3143 3152 -0.748157 0.74815689446238
7 979.701416 44.155472 887.566284 47.915504 980 882 3158.966797 43.588821 3124.379639 43.356808 3159 3122 -0.549758 0.549757912224125
8 954.722473 52.92292 846.463867 34.192272 959 839 3136.574219 45.935963 3097.331299 43.65781 3134 3095 -0.645252 0.645251629292185
9 948.09906 48.349091 1026.614502 1352.70166 952 833 3133.85376 43.839897 3360.102295 1988.446045 3135 3090 -0.570533 0.570532783841071
10 964.306213 37.49054 840.704834 36.638165 965 834 3118.971191 36.873734 3088.192871 36.335464 3115 3089 -1.23624 1.23624346901631
11 967.461548 126.25061 852.763916 43.310883 967 844 3155.023926 113.891136 3105.909668 39.167194 3149 3105 -0.525645 0.525645190098079
12 934.023499 53.485958 812.560974 35.247795 945 810 3157.938965 46.587513 3121.737793 49.185623 3161 3123 -0.994379 0.994379279706594
13 842.93335 77.164619 746.169678 52.791538 871 741 3207.638184 69.634132 3135.296875 59.972313 3214 3128 0.342705 -0.342704941563672
14 712.952148 86.463417 669.254517 61.524109 727 663 3175.49292 80.477913 3114.02417 60.030987 3186 3110 1.21612 -1.21611665210008
15 610.062195 31.740398 600.606079 32.588844 613 595 3097.58374 58.795067 3058.157471 49.622223 3096 3053 2.04147 -2.04146938929176
16 684.302856 48.882484 676.868042 60.46698 684 685 3049.101074 34.665058 3048.5625 35.8894 3049 3048 0.0695346 -0.0695345819422544
17 681.37323 27.134537 701.284851 49.382877 679 696 3091.095703 43.721695 3098.054443 49.545158 3092 3095 0.0742779 -0.0742779419588286
18 843.46637 83.058434 814.075012 121.421646 834 792 3177.480713 53.726269 3175.887451 62.63089 3171 3166 -0.677206 0.677205874104517
19 946.701904 88.721901 913.561279 98.657555 961 891 3219.543213 79.890068 3196.716064 73.381035 3233 3182 0.275708 -0.275708382896805
20 966.753601 97.130486 934.956543 94.04213 986 891 3198.95166 79.816093 3175.159424 78.412285 3203 3166 -0.355139 0.355138735782586

Total number of rows: 18144

Table truncated, full table size 2419 Kbytes.




Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap