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Sample GSM112040 Query DataSets for GSM112040
Status Public on Jul 21, 2006
Title Effect of drugs, DITPA and Captopril on rat heart failure-File 75
Sample type RNA
 
Channel 1
Source name Infarcted rat left ventricle
Organism Rattus norvegicus
Characteristics Infarcted rat left ventricle
Extracted molecule polyA RNA
Label Cy3
 
Channel 2
Source name Infarcted rat left ventricle treated with DITPA and Captopril
Organism Rattus norvegicus
Characteristics Infarcted rat left ventricle treated with DITPA and Captopril
Extracted molecule polyA RNA
Label Cy5
 
 
Description Rats after ligation of the left anterior descending coronary artery were used as a model of heart failure. Four groups of animals were studied using microarrays. Here, heart failure animals were compared with heart failure animals treated with DITPA and Captopril
Data processing The data ratio was normalized using a location and intensity dependent Lowess formula
 
Submission date Jun 01, 2006
Last update date Jul 21, 2006
Contact name Niranjan Maitra
E-mail(s) nmaitra@email.arizona.edu
Phone 520-626-4966
Fax 520-626-8408
Organization name University of Arizona
Department Sarver Heart Center
Lab Eugene Morkin
Street address 1501 North Campbell Avenue
City Tucson
State/province AZ
ZIP/Postal code 85724
Country USA
 
Platform ID GPL3801
Series (1)
GSE4963 Heart Failure, DITPA and Captopril

Data table header descriptions
ID_REF
CH1_MEAN
CH1_SD
CH1_BKG_MEAN
CH1_BKG_SD
CH1_MEDIAN
CH1_BKG_MEDIAN
CH2_MEAN
CH2_SD
CH2_BKG_MEAN
CH2_BKG_SD
CH2_MEDIAN
CH2_BKG_MEDIAN
VALUE log2 ratio (Cy5/Cy3)
INV_VALUE log2 ratio (Cy3/Cy5)

Data table
ID_REF CH1_MEAN CH1_SD CH1_BKG_MEAN CH1_BKG_SD CH1_MEDIAN CH1_BKG_MEDIAN CH2_MEAN CH2_SD CH2_BKG_MEAN CH2_BKG_SD CH2_MEDIAN CH2_BKG_MEDIAN VALUE INV_VALUE
1 785.645935 157.479553 715.196167 86.869736 762 706 2942.763916 57.014965 2904.717773 50.363873 2941 2905 0.348957 -0.348957000103821
2 752.987488 102.610207 720.590881 98.490875 761 710 2884.418701 43.027775 2884.990967 41.533726 2883 2882 -0.622977 0.622976739672377
3 742.556946 53.620327 771.256531 78.412514 744 759 2885.272217 36.464909 2896.660889 43.77211 2884 2892 -0.234291 0.234290514998652
4 699.937134 35.602535 739.324646 85.111595 695 714 2885.836426 38.060226 2892.895996 43.474121 2884 2893 -0.306969 0.306969030908659
5 784.4151 93.139755 810.671021 1396.012085 787 660 2917.742188 56.304455 2964.649414 853.734619 2919 2879 -0.209005 0.209004843689655
6 564.421387 18.025778 596.363647 72.731346 564 578 2889.974854 50.19796 2899.401855 58.819164 2891 2896 -0.238395 0.238394830432210
7 793.760986 223.074677 685.082275 80.483803 782 676 2974.503174 96.989227 2930.268311 56.417522 2965 2931 0.0348923 -0.0348923251652469
8 795.161499 59.113541 737.151489 106.368904 791 703 2921.782715 44.52158 2914.138428 52.748615 2925 2915 -1.11388 1.11388495662739
9 718.613953 24.324951 726.891785 76.742943 719 712 2896.348145 35.137573 2891.926514 35.717354 2898 2893 0.118113 -0.118112629293211
10 811.975159 129.034546 706.203491 99.992287 820 699 2947.782715 49.289288 2885.385254 43.426228 2944 2884 0.611804 -0.611804004264314
11 567.391296 18.809629 588.382751 56.485996 569 576 2869.341553 40.75584 2868.196289 41.281563 2868 2867 0.275654 -0.275654322335122
12 634.289307 40.377701 609.727295 48.942459 635 612 2875.440186 39.159943 2870.134277 40.473648 2880 2870 -0.0524164 0.0524164261869196
13 639.450012 29.26388 597.489197 34.336174 637 597 2879.106201 39.629829 2862.688232 37.347927 2882 2863 0.102745 -0.102744891458862
14 640.360779 25.526613 590.203491 28.821602 641 593 2883.303711 36.683659 2860.883057 35.575996 2881 2860 0.385535 -0.385535476981024
15 662.53125 23.568943 615.203491 96.553764 664 607 2885.074951 37.682308 2873.259766 55.793667 2882 2867 -0.0393369 0.039336944161728
16 764.496826 414.207458 721.83252 87.196579 724 719 2919.641602 113.471863 2898.263184 38.186443 2908 2900 0.223681 -0.223681415955128
17 717.062866 58.346169 814.502136 118.40538 708 824 2898.968506 39.115288 2921.432861 50.19426 2897 2918 0.476361 -0.476361294423818
18 732.373413 89.211708 684.844177 128.865158 740 646 2928.164551 47.789978 2905.272705 55.972805 2927 2906 -0.423644 0.423644319336223
19 599.512634 26.275787 580.1073 41.239353 600 570 2895.841797 38.997066 2881.102539 38.854362 2891 2882 0.247003 -0.247003412423758
20 624.582275 39.742996 594.93866 47.283562 619 589 2892.056885 40.538296 2846.89624 59.973206 2891 2853 1.42557 -1.42557018545532

Total number of rows: 18144

Table truncated, full table size 2420 Kbytes.




Supplementary data files not provided

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